Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13009 |
Symbol | |
ID | 5223697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 3362978 |
End bp | 3364315 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640607777 |
Product | integral membrane protein |
Protein accession | YP_001288938 |
Protein GI | 148824184 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 152 |
Plasmid unclonability p-value | 7.64265e-25 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 212 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGAG ATCCGACTGG GGTGGGTGCG CGCTGGGCGA TCATGATCGT CTCGCTGGGG GTGACCGCAA GCTCGTTTCT CTTCATCAAC GGTGTCGCGT TCTTGATCCC CCGGCTGGAA AATGCGCGCG GAACCCCGCT ATCTCACGCG GGTCTGTTGG CGTCGATGCC CAGCTGGGGC CTGGTGGTCA CGATGTTCGC CTGGGGCTAT CTGCTCGATC ACGTCGGCGA ACGGATGGTG ATGGCCGTGG GCTCGGCGCT GACCGCCGCG GCCGCCTACG CCGCGGCATC GGTTCATTCG CTGCTGTGGA TCGGTGTCTT CCTGTTTCTC GGCGGCATGG CCGCCGGTGG TTGCAACAGC GCCGGCGGGC GGCTGGTCTC GGGTTGGTTC CCGCCCCAGC AACGCGGTCT GGCCATGGGA ATCCGCCAGA CCGCACAACC TTTGGGCATC GCCTCCGGCG CGTTGGTGAT ACCCGAACTG GCCGAACGCG GGGTGCACGC AGGGCTGATG TTTCCCGCCG TCGTGTGCAC GTTGGCCGCG GTGGCCAGCG TGCTCGGTAT CGTCGACCCA CCGCGAAAAT CCCGCACGAA AGCCTCCGAA CAGGAGCTGG CCAGCCCTTA TCGGGGATCG TCGATCCTGT GGCGGATACA CGCGGCGTCG GCGTTGCTGA TGATGCCGCA GACGGTGACC GTGACGTTCA TGTTGGTCTG GCTGATCAAC CACCACGGCT GGTCGGTCGC GCAGGCCGGT GTCTTGGTGA CCATATCGCA GCTGCTGGGG GCGCTGGGCC GGGTCGCGGT CGGCCGCTGG TCGGACCATG TCGGGTCACG CATGCGTCCC GTCCGCCTGA TCGCCGCTGC CGCCGCGGCG ACGTTGTTTC TGCTCGCGGC GGTCGATAAC GAGGGCTCGA GATATGACGT GCTGCTCATG ATCGCCATCT CGGTGATCGC CGTTCTGGAC AACGGGCTAG AAGCCACCGC GATCACCGAG TACGCCGGAC CGTACTGGAG TGGCCGGGCG CTGGGTATCC AGAACACTAC GCAGCGGCTG ATGGCGGCCG CCGGACCCCC ACTGTTCGGT AGTTTGATCA CCACGGCGGC CTACCCGACG GCATGGGCCT TATGCGGTGT GTTCCCGCTG GCCGCGGTGC CGCTGGTGCC GGTTCGGCTG CTCCCACCCG GCTTGGAGAC TAGAGCGCGG CGGCAATCCG TTCGCCGACA TCGCTGGTGG CAAGCCGTTC GCTGCCACGC GTGGCCAAAT GGGCCTCGAC GGCCCGGTCC ACCCGGGCAG CCGCGTCGTG TTCGCCAAGG TGGGACAGCA ATAACGCCAC CGACATGA
|
Protein sequence | MSRDPTGVGA RWAIMIVSLG VTASSFLFIN GVAFLIPRLE NARGTPLSHA GLLASMPSWG LVVTMFAWGY LLDHVGERMV MAVGSALTAA AAYAAASVHS LLWIGVFLFL GGMAAGGCNS AGGRLVSGWF PPQQRGLAMG IRQTAQPLGI ASGALVIPEL AERGVHAGLM FPAVVCTLAA VASVLGIVDP PRKSRTKASE QELASPYRGS SILWRIHAAS ALLMMPQTVT VTFMLVWLIN HHGWSVAQAG VLVTISQLLG ALGRVAVGRW SDHVGSRMRP VRLIAAAAAA TLFLLAAVDN EGSRYDVLLM IAISVIAVLD NGLEATAITE YAGPYWSGRA LGIQNTTQRL MAAAGPPLFG SLITTAAYPT AWALCGVFPL AAVPLVPVRL LPPGLETRAR RQSVRRHRWW QAVRCHAWPN GPRRPGPPGQ PRRVRQGGTA ITPPT
|
| |