Gene TBFG_13001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13001 
Symbol 
ID5223687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3354885 
End bp3355529 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID640607767 
ProductDNA-binding protein hupB (histone-like protein) 
Protein accessionYP_001288930 
Protein GI148824176 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones424 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones223 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CAGAGCTCAT TGACGTGCTC ACACAGAAAT TGGGCTCGGA CCGTCGGCAG 
GCGACCGCCG CCGTCGAGAA TGTCGTTGAC ACGATTGTGC GTGCGGTACA CAAAGGCGAC
AGCGTCACCA TTACCGGGTT CGGTGTGTTC GAACAGCGTC GCCGCGCGGC TCGAGTGGCC
CGCAATCCGC GTACCGGCGA GACAGTAAAG GTGAAGCCGA CGTCGGTGCC GGCGTTCCGC
CCGGGCGCGC AATTCAAAGC GGTTGTGTCT GGCGCGCAGC GTCTCCCGGC AGAAGGACCC
GCTGTTAAGC GTGGTGTGGG GGCCAGTGCA GCCAAGAAGG TAGCGAAGAA GGCACCTGCC
AAGAAGGCGA CAAAGGCCGC CAAGAAGGCG GCGACCAAGG CGCCCGCCAG GAAGGCGGCG
ACCAAGGCGC CCGCCAAGAA AGCGGCGACC AAGGCGCCCG CCAAGAAAGC TGTCAAGGCC
ACGAAGTCAC CCGCCAAGAA GGTGACCAAG GCGGTGAAGA AGACCGCGGT CAAGGCATCG
GTGCGTAAGG CGGCGACCAA GGCGCCGGCA AAGAAGGCAG CGGCCAAGCG GCCGGCTACC
AAGGCTCCCG CCAAGAAGGC AACCGCTCGG CGGGGTCGCA AATAG
 
Protein sequence
MNKAELIDVL TQKLGSDRRQ ATAAVENVVD TIVRAVHKGD SVTITGFGVF EQRRRAARVA 
RNPRTGETVK VKPTSVPAFR PGAQFKAVVS GAQRLPAEGP AVKRGVGASA AKKVAKKAPA
KKATKAAKKA ATKAPARKAA TKAPAKKAAT KAPAKKAVKA TKSPAKKVTK AVKKTAVKAS
VRKAATKAPA KKAAAKRPAT KAPAKKATAR RGRK