Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_13001 |
Symbol | |
ID | 5223687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 3354885 |
End bp | 3355529 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640607767 |
Product | DNA-binding protein hupB (histone-like protein) |
Protein accession | YP_001288930 |
Protein GI | 148824176 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 424 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 223 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG CAGAGCTCAT TGACGTGCTC ACACAGAAAT TGGGCTCGGA CCGTCGGCAG GCGACCGCCG CCGTCGAGAA TGTCGTTGAC ACGATTGTGC GTGCGGTACA CAAAGGCGAC AGCGTCACCA TTACCGGGTT CGGTGTGTTC GAACAGCGTC GCCGCGCGGC TCGAGTGGCC CGCAATCCGC GTACCGGCGA GACAGTAAAG GTGAAGCCGA CGTCGGTGCC GGCGTTCCGC CCGGGCGCGC AATTCAAAGC GGTTGTGTCT GGCGCGCAGC GTCTCCCGGC AGAAGGACCC GCTGTTAAGC GTGGTGTGGG GGCCAGTGCA GCCAAGAAGG TAGCGAAGAA GGCACCTGCC AAGAAGGCGA CAAAGGCCGC CAAGAAGGCG GCGACCAAGG CGCCCGCCAG GAAGGCGGCG ACCAAGGCGC CCGCCAAGAA AGCGGCGACC AAGGCGCCCG CCAAGAAAGC TGTCAAGGCC ACGAAGTCAC CCGCCAAGAA GGTGACCAAG GCGGTGAAGA AGACCGCGGT CAAGGCATCG GTGCGTAAGG CGGCGACCAA GGCGCCGGCA AAGAAGGCAG CGGCCAAGCG GCCGGCTACC AAGGCTCCCG CCAAGAAGGC AACCGCTCGG CGGGGTCGCA AATAG
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Protein sequence | MNKAELIDVL TQKLGSDRRQ ATAAVENVVD TIVRAVHKGD SVTITGFGVF EQRRRAARVA RNPRTGETVK VKPTSVPAFR PGAQFKAVVS GAQRLPAEGP AVKRGVGASA AKKVAKKAPA KKATKAAKKA ATKAPARKAA TKAPAKKAAT KAPAKKAVKA TKSPAKKVTK AVKKTAVKAS VRKAATKAPA KKAAAKRPAT KAPAKKATAR RGRK
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