| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12993 |
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| Symbol | |
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| ID | 5223679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3345258 |
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| End bp | 3346637 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640607759 |
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| Product | transposase |
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| Protein accession | YP_001288922 |
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| Protein GI | 148824168 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 230 |
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| Plasmid unclonability p-value | 0.000000929698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 204 |
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| Fosmid unclonability p-value | 0.662784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGT TCGAGGTTCC CGATGGCTGG ACGGTCCAAG CGTTTCGGTT CACGCTGGAC
CCGACCGAGG ACCAGGCCAA GGCGCTGGCA CGGCATTTCG GTGCTCGTCG CAAGGCATAC
AACTGGACCG TGGCCACCCT GAAAGCCGAC ATCCAGGCGT GGCATGCCAG CGGGACCGTG
ACAGCGAAAC CGTCGCTGCG CGTGCTGCGC AAACGCTGGA ACACCGTCAA GGACGACGTG
TGCGTCAACA CCGAGACCGG TGTCGCGTGG TGGCCTGAAT GCTCAAAAGA GGCCTACGCC
GATGGCATCG CGGGTGCGGT CGAGGCGTAC TGGAACTGGC AGACCTCCCG CGCCGGCAAA
CGCGCCGGTA AACGGGTCGG GTTTCCCCGT TTCAAACGCA AAGGCCGCGA CCAGGATCGA
GTGTCGTTCA CGACCGGAGC GATGCGTGTG GAACCCGACC GCCGTCACCT CACCCTGCCG
GTCATCGGGA CCGTCCGCAC GCACGAGAAC ACCCGCCGTA TCGAACGCCT GATCAAGGCC
GGTCGGGCGC GAGTATTGGC GATCTCGGTG CGCCGCAACG GCACTCGTCT GGATGCCAGT
GTGCGGGTGC TTGTCCAGCG TCCGCAGCAG CCGAAGGTGG TGCACCCCGG TTCGCGGGTT
GGTGTCGATG TCGGGGTCCG GCGCCTGGCG ACGGTCGCCA CCGCTGACGG CACGGCGATC
GAGCAGGTTG AGAACCCACG ACCGCTCGGC GCCGCGCTGC GCGAGCTACG CCACGTGTGC
CGGGCCCGTT CGCGTTGCAC GAAAGGTTCA CGGCGCTACC GTGAGCGCAC CACTCAGATT
TCCCGGTTGC ATCGCCGGGT CAACGATGTC CGCACCCATC ACCTGCACGT CCTGACGACA
CGGTTGGCTC AAACCCACGG CCGCATTGTT GTCGAAGGCT TGGACGCGAC AGAGATGTTG
CGGCAAAAAG GGTTGCCGGG TGCCCGCGCT CGTCGGCGCG GACTGTCGGA TGCGGCCCTG
GGCACTCCGC GTCGGCACTT GTCCTACAAG ACAGTCTGGT ACGGGTCGGC GCTGGTGGTC
GCCGACCGCT GGTTCCCGTC GTCGAAAACC TGCCACGCCT GCCGGCATGT GCAAGACATC
GGCTGGGACG AACAATGGCA ATGCGACCGA TGCTCAGTGG TCCATCAGCG TGATGACTGC
GCTGCCATCA ACCTCGCACG CTACGAGGAA ACATCCAGCA TCGTCGGCCC AGTTGGGGCC
GCCGTCAAGC GTGGAGCCGA CCGTAAGACC GGGCCTCGCC CGGCAGGTGG CTGTGAAGCG
CGGAAGGGAA GCAGCCCCAA GGCTGCCGAA CAACCCCGAG ACGGGGTGCA AGTCGCGTGA
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| Protein sequence | MPKFEVPDGW TVQAFRFTLD PTEDQAKALA RHFGARRKAY NWTVATLKAD IQAWHASGTV
TAKPSLRVLR KRWNTVKDDV CVNTETGVAW WPECSKEAYA DGIAGAVEAY WNWQTSRAGK
RAGKRVGFPR FKRKGRDQDR VSFTTGAMRV EPDRRHLTLP VIGTVRTHEN TRRIERLIKA
GRARVLAISV RRNGTRLDAS VRVLVQRPQQ PKVVHPGSRV GVDVGVRRLA TVATADGTAI
EQVENPRPLG AALRELRHVC RARSRCTKGS RRYRERTTQI SRLHRRVNDV RTHHLHVLTT
RLAQTHGRIV VEGLDATEML RQKGLPGARA RRRGLSDAAL GTPRRHLSYK TVWYGSALVV
ADRWFPSSKT CHACRHVQDI GWDEQWQCDR CSVVHQRDDC AAINLARYEE TSSIVGPVGA
AVKRGADRKT GPRPAGGCEA RKGSSPKAAE QPRDGVQVA
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