Gene TBFG_12940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12940 
Symbolrnc 
ID5223626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3251302 
End bp3252024 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID640607706 
Productribonuclease III 
Protein accessionYP_001288869 
Protein GI148824115 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones383 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones216 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGT CACGACAACC CCTGCTCGAC GCACTCGGTG TGGACCTCCC GGACGAGCTG 
CTCTCACTGG CGTTGACCCA CCGCAGCTAC GCCTACGAGA ACGGCGGGCT GCCGACCAAC
GAGCGTTTGG AGTTTCTCGG CGATGCCGTG CTAGGGCTGA CCATCACCGA CGCGCTGTTC
CATCGTCATC CTGATCGGTC GGAGGGGGAT CTGGCCAAAC TGCGGGCCAG CGTAGTCAAC
ACCCAGGCCC TGGCCGACGT CGCACGCCGC CTCTGTGCGG AAGGCCTCGG TGTTCACGTG
CTATTGGGTC GCGGCGAGGC GAACACCGGC GGGGCCGACA AGTCCAGCAT TCTGGCCGAC
GGTATGGAAT CGCTGCTGGG CGCGATCTAC CTGCAACACG GTATGGAGAA GGCCCGTGAG
GTGATCCTGC GGCTGTTTGG CCCGTTGCTG GACGCCGCGC CGACCCTGGG TGCGGGATTG
GATTGGAAGA CCAGCTTGCA GGAGCTGACT GCAGCGCGAG GGCTGGGTGC GCCGTCATAC
CTGGTCACCT CCACCGGCCC GGACCACGAT AAGGAATTCA CCGCGGTGGT TGTCGTGATG
GACAGCGAAT ACGGTTCAGG AGTGGGCCGG TCCAAAAAAG AAGCCGAGCA AAAAGCCGCG
GCGGCCGCTT GGAAAGCCCT GGAAGTGCTC GACAACGCCA TGCCGGGCAA AACCTCCGCC
TAA
 
Protein sequence
MIRSRQPLLD ALGVDLPDEL LSLALTHRSY AYENGGLPTN ERLEFLGDAV LGLTITDALF 
HRHPDRSEGD LAKLRASVVN TQALADVARR LCAEGLGVHV LLGRGEANTG GADKSSILAD
GMESLLGAIY LQHGMEKARE VILRLFGPLL DAAPTLGAGL DWKTSLQELT AARGLGAPSY
LVTSTGPDHD KEFTAVVVVM DSEYGSGVGR SKKEAEQKAA AAAWKALEVL DNAMPGKTSA