Gene TBFG_12936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12936 
Symbol 
ID5223622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3245662 
End bp3249279 
Gene Length3618 bp 
Protein Length1205 aa 
Translation table11 
GC content67% 
IMG OID640607702 
Productchromosome partitioning protein smc 
Protein accessionYP_001288865 
Protein GI148824111 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones100 
Plasmid unclonability p-value0.0598484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones179 
Fosmid unclonability p-value0.252083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCTCA AGAGTCTGAC GTTGAAGGGC TTCAAGTCCT TCGCCGCGCC GACGACTTTA 
CGCTTCGAGC CGGGCATTAC GGCCGTCGTT GGGCCCAACG GCTCCGGCAA ATCCAATGTG
GTCGATGCCC TGGCGTGGGT GATGGGGGAG CAGGGGGCAA AGACGCTGCG CGGCGGCAAG
ATGGAAGACG TCATCTTCGC CGGCACCTCG TCGCGTGCGC CGCTGGGCCG CGCCGAAGTC
ACCGTTAGCA TCGACAACTC CGACAACGCA CTGCCTATCG AATACACCGA GGTGTCGATC
ACCCGAAGAA TGTTTCGCGA CGGTGCCAGC GAATACGAAA TCAACGGCAG CAGTTGCCGT
TTGATGGATG TGCAGGAGTT GCTGAGCGAC TCCGGCATCG GCCGTGAGAT GCATGTGATT
GTTGGGCAAG GGAAGCTCGA GGAGATCTTG CAGTCGCGGC CTGAGGATCG GCGGGCGTTC
ATCGAGGAAG CCGCCGGTGT GCTCAAGCAT CGCAAGCGCA AGGAAAAAGC TCTGCGCAAA
CTCGACACGA TGGCGGCGAA CCTGGCCCGG CTCACCGATC TGACCACCGA GCTCCGGCGT
CAACTCAAAC CGCTGGGCCG GCAGGCCGAG GCGGCCCAGC GTGCCGCGGC CATCCAAGCC
GATCTGCGCG ACGCCCGGCT GCGCCTGGCG GCCGACGACT TGGTAAGCCG CAGAGCCGAA
CGGGAAGCGG TCTTTCAGGC CGAGGCTGCG ATGCGCCGCG AGCATGACGA GGCCGCCGCC
CGGCTGGCGG TGGCATCCGA GGAGCTGGCC GCGCATGAGT CCGCGGTCGC CGAACTCTCG
ACGCGGGCCG AGTCGATCCA GCACACTTGG TTCGGGCTGT CTGCGCTGGC CGAACGGGTG
GACGCTACGG TGCGCATCGC CAGCGAACGC GCCCATCATC TCGATATCGA GCCGGTAGCG
GTCAGCGACA CCGACCCCAG AAAGCCCGAG GAGCTAGAAG CCGAGGCCCA GCAGGTGGCC
GTCGCCGAGC AACAACTGTT AGCGGAGCTG GACGCGGCGC GTGCCCGACT CGATGCTGCC
CGTGCAGAGC TGGCCGACCG GGAGCGCCGC GCCGCCGAGG CCGACCGGGC ACACCTGGCG
GCGGTCCGGG AGGAGGCGGA CCGCCGTGAG GGACTGGCGC GGCTGGCTGG CCAGGTGGAG
ACCATGCGGG CGCGTGTCGA ATCGATCGAT GAGAGCGTGG CACGGTTGTC CGAGCGGATC
GAGGATGCCG CAATGCGCGC CCAGCAGACC CGAGCCGAGT TCGAAACCGT GCAGGGCCGC
ATCGGTGAAC TGGATCAAGG CGAGGTCGGC CTGGATGAGC ACCACGAGCG TACTGTGGCC
GCGTTGCGGT TGGCCGACGA ACGCGTCGCC GAGCTGCAAT CCGCCGAACG CGCCGCCGAA
CGCCAGGTGG CATCGCTACG GGCTCGCATC GATGCGCTCG CAGTGGGGCT ACAGCGCAAG
GACGGCGCGG CGTGGCTGGC GCACAATCGC AGTGGCGCAG GGCTTTTCGG TTCGATCGCC
CAATTGGTGA AGGTACTTTC CGGCTATGAA GCGGCACTGG CCGCGGCGCT CGGGCCGGCG
GCCGACGCAC TTGCGGTGGA CGGCCTGACT GCCGCGGGTA GTGCCGTCAG CGCACTCAAA
CAAGCCGACG GCGGTCGCGC GGTCCTCGTG CTGAGTGACT GGCCGGCCCC GCAAGCCCCC
CAATCCGCCT CGGGGGAGAT GCTGCCTAGC GGCGCCCAGT GGGCCCTAGA CCTGGTCGAG
TCTCCACCGC AGTTGGTTGG CGCGATGATC GCCATGCTTT CGGGTGTCGC GGTGGTCAAC
GACCTGACTG AGGCAATGGG CCTGGTCGAG ATTCGTCCGG AGCTACGCGC GGTCACCGTT
GACGGTGATC TGGTGGGCGC CGGCTGGGTC AGCGGCGGAT CGGACCGCAA GCTGTCCACC
TTGGAGGTCA CCTCCGAGAT CGACAAGGCC AGGAGTGAGC TGGCCGCTGC CGAGGCGCTG
GCGGCGCAAT TGAATGCGGC CCTGGCCGGT GCGCTGACCG AGCAGTCCGC CCGCCAGGAC
GCGGCCGAGC AAGCCTTGGC CGCGCTTAAC GAATCCGACA CGGCCATCTC GGCGATGTAC
GAGCAGCTGG GCCGCCTCGG GCAGGAGGCC CGCGCGGCGG AAGAAGAGTG GAACCGGTTG
CTGCAGCAGC GTACGGAACA GGAAGCCGTG CGCACACAGA CTCTCGACGA CGTCATACAA
CTTGAGACCC AGCTGCGTAA GGCCCAGGAG ACCCAACGGG TGCAGGTGGC CCAACCGATC
GACCGCCAGG CGATCAGTGC CGCTGCCGAT CGCGCCCGCG GTGTCGAAGT GGAAGCCCGG
CTGGCGGTGC GCACCGCCGA GGAACGCGCC AACGCGGTTC GCGGGCGGGC CGATTCGCTG
CGCCGTGCGG CTGCGGCGGA ACGTGAGGCG CGGGTGCGGG CTCAGCAAGC ACGCGCCGCA
AGACTGCATG CGGCCGCGGT GGCCGCAGCG GTCGCCGACT GCGGACGGCT GCTGGCCGGG
CGGTTGCACC GGGCGGTGGA CGGGGCGTCG CAACTGCGCG ACGCGTCGGC CGCGCAACGT
CAGCAGCGGT TAGCGGCGAT GGCCGCGGTG CGCGACGAGG TGAACACGCT GAGCGCCCGA
GTGGGGGAAC TCACCGATTC GCTGCACCGC GACGAGCTGG CTAACGCGCA GGCGGCGCTG
CGTATCGAGC AGCTTGAGCA GATGGTGCTA GAGCAGTTCG GAATGGCGCC GGCCGACTTG
ATCACCGAAT ACGGTCCACA TGTGGCGCTA CCACCGACCG AGCTCGAGAT GGCTGAGTTC
GAGCAAGCCC GCGAACGCGG CGAGCAGGTG ATTGCGCCCG CCCCCATGCC GTTCGACCGG
GTTACCCAGG AGCGCCGGGC CAAACGCGCC GAGCGTGCGC TTGCCGAGTT GGGCAGGGTC
AACCCGCTGG CGCTCGAAGA GTTTGCTGCC TTGGAGGAGC GCTACAATTT CCTGTCCACC
CAACTCGAGG ATGTCAAGGC TGCCCGCAAG GATCTGCTGG GCGTCGTCGC CGATGTTGAC
GCCCGCATCC TGCAGGTGTT CAATGACGCG TTCGTAGACG TGGAACGCGA ATTTCGCGGC
GTGTTCACCG CATTGTTCCC CGGTGGTGAA GGACGGCTGC GGCTGACCGA GCCCGACGAC
ATGCTCACCA CCGGCATCGA GGTCGAAGCC CGCCCGCCGG GCAAGAAGAT TACCCGACTG
TCTTTGCTCT CCGGTGGCGA GAAGGCGCTG ACCGCGGTGG CGATGCTGGT CGCGATCTTT
CGTGCCCGTC CATCGCCGTT CTACATCATG GACGAGGTGG AGGCCGCCCT CGACGACGTG
AACCTGCGCC GACTGCTCAG CCTGTTCGAA CAGCTGCGAG AGCAGTCGCA GATCATCATC
ATCACCCACC AGAAGCCGAC GATGGAGGTC GCGGACGCAC TGTACGGCGT AACCATGCAG
AACGACGGCA TCACCGCGGT CATCTCGCAG CGCATGCGCG GTCAGCAGGT GGATCAGCTG
GTTACCAATT CCTCGTAG
 
Protein sequence
MYLKSLTLKG FKSFAAPTTL RFEPGITAVV GPNGSGKSNV VDALAWVMGE QGAKTLRGGK 
MEDVIFAGTS SRAPLGRAEV TVSIDNSDNA LPIEYTEVSI TRRMFRDGAS EYEINGSSCR
LMDVQELLSD SGIGREMHVI VGQGKLEEIL QSRPEDRRAF IEEAAGVLKH RKRKEKALRK
LDTMAANLAR LTDLTTELRR QLKPLGRQAE AAQRAAAIQA DLRDARLRLA ADDLVSRRAE
REAVFQAEAA MRREHDEAAA RLAVASEELA AHESAVAELS TRAESIQHTW FGLSALAERV
DATVRIASER AHHLDIEPVA VSDTDPRKPE ELEAEAQQVA VAEQQLLAEL DAARARLDAA
RAELADRERR AAEADRAHLA AVREEADRRE GLARLAGQVE TMRARVESID ESVARLSERI
EDAAMRAQQT RAEFETVQGR IGELDQGEVG LDEHHERTVA ALRLADERVA ELQSAERAAE
RQVASLRARI DALAVGLQRK DGAAWLAHNR SGAGLFGSIA QLVKVLSGYE AALAAALGPA
ADALAVDGLT AAGSAVSALK QADGGRAVLV LSDWPAPQAP QSASGEMLPS GAQWALDLVE
SPPQLVGAMI AMLSGVAVVN DLTEAMGLVE IRPELRAVTV DGDLVGAGWV SGGSDRKLST
LEVTSEIDKA RSELAAAEAL AAQLNAALAG ALTEQSARQD AAEQALAALN ESDTAISAMY
EQLGRLGQEA RAAEEEWNRL LQQRTEQEAV RTQTLDDVIQ LETQLRKAQE TQRVQVAQPI
DRQAISAAAD RARGVEVEAR LAVRTAEERA NAVRGRADSL RRAAAAEREA RVRAQQARAA
RLHAAAVAAA VADCGRLLAG RLHRAVDGAS QLRDASAAQR QQRLAAMAAV RDEVNTLSAR
VGELTDSLHR DELANAQAAL RIEQLEQMVL EQFGMAPADL ITEYGPHVAL PPTELEMAEF
EQARERGEQV IAPAPMPFDR VTQERRAKRA ERALAELGRV NPLALEEFAA LEERYNFLST
QLEDVKAARK DLLGVVADVD ARILQVFNDA FVDVEREFRG VFTALFPGGE GRLRLTEPDD
MLTTGIEVEA RPPGKKITRL SLLSGGEKAL TAVAMLVAIF RARPSPFYIM DEVEAALDDV
NLRRLLSLFE QLREQSQIII ITHQKPTMEV ADALYGVTMQ NDGITAVISQ RMRGQQVDQL
VTNSS