Gene TBFG_12917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12917 
Symbol 
ID5223603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3224499 
End bp3225383 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID640607683 
Productsignal peptidase I lepB (leader peptidase I) 
Protein accessionYP_001288846 
Protein GI148824092 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones465 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones204 
Fosmid unclonability p-value0.710177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAA CCACGGACTC CCCATCGGAG CGCCAGCCGG GTCCGGCAGA GCCGGAGCTC 
TCCTCCCGGG ACCCGGACAT TGCCGGCCAG GTCTTCGACG CAGCCCCGTT CGACGCAGCC
CCGGATGCGG ACTCCGAAGG CGACTCCAAG GCGGCCAAAA CGGACGAGCC GCGGCCCGCG
AAGCGATCAA CGCTGCGGGA GTTCGCGGTG CTGGCGGTGA TTGCTGTGGT GCTCTACTAC
GTCATGCTGA CGTTTGTCGC GCGCCCTTAT CTGATTCCGT CGGAATCGAT GGAACCCACG
TTGCACGGGT GTTCGACGTG CGTCGGCGAC CGCATCATGG TGGACAAACT CAGCTACCGC
TTCGGCTCAC CGCAACCTGG CGACGTCATC GTCTTCAGGG GACCGCCGTC GTGGAACGTT
GGTTACAAGT CGATCCGTTC GCACAACGTC GCCGTGCGCT GGGTGCAGAA CGCGTTGTCG
TTCATCGGTT TCGTGCCTCC CGACGAGAAC GACCTGGTCA AGCGTGTCAT CGCGGTCGGC
GGACAGACGG TTCAATGCCG GTCCGACACC GGCCTGACGG TCAACGGCAG GCCACTGAAG
GAGCCATACC TGGATCCGGC CACCATGATG GCCGACCCGT CGATATACCC GTGCCTGGGC
AGCGAGTTCG GGCCGGTCAC CGTCCCGCCC GGGCGTGTCT GGGTGATGGG CGACAACCGC
ACCCATTCGG CGGATTCCCG CGCTCACTGC CCGTTGCTAT GTACTGACGA TCCGCTACCG
GGGACCGTGC CGGTGGCCAA CGTCATCGGT AAGGCCAGGT TGATCGTGTG GCCGCCGTCG
CGTTGGGGTG TTGTGCGTTC GGTGAATCCC CAGCAAGGTC GGTAG
 
Protein sequence
MTETTDSPSE RQPGPAEPEL SSRDPDIAGQ VFDAAPFDAA PDADSEGDSK AAKTDEPRPA 
KRSTLREFAV LAVIAVVLYY VMLTFVARPY LIPSESMEPT LHGCSTCVGD RIMVDKLSYR
FGSPQPGDVI VFRGPPSWNV GYKSIRSHNV AVRWVQNALS FIGFVPPDEN DLVKRVIAVG
GQTVQCRSDT GLTVNGRPLK EPYLDPATMM ADPSIYPCLG SEFGPVTVPP GRVWVMGDNR
THSADSRAHC PLLCTDDPLP GTVPVANVIG KARLIVWPPS RWGVVRSVNP QQGR