Gene TBFG_12890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12890 
Symbol 
ID5223576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3198560 
End bp3199141 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content64% 
IMG OID640607656 
Productmajor secreted immunogenic protein mpt70 
Protein accessionYP_001288819 
Protein GI148824065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones442 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones218 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA AGAACACAAT TGCGGCAACC AGTTTCGCGG CGGCCGGCCT GGCGGCTCTG 
GCGGTGGCTG TCTCACCGCC GGCGGCCGCA GGCGATCTGG TGGGCCCGGG CTGCGCGGAA
TACGCGGCAG CCAATCCCAC TGGGCCGGCC TCGGTGCAGG GAATGTCGCA GGACCCGGTC
GCGGTGGCGG CCTCGAACAA TCCGGAGTTG ACAACGCTGA CGGCTGCACT GTCGGGCCAG
CTCAATCCGC AAGTAAACCT GGTGGACACC CTCAACAGCG GTCAGTACAC GGTGTTCGCA
CCGACCAACG CGGCATTTAG CAAGCTGCCG GCATCCACGA TCGACGAGCT CAAGACCAAT
TCGTCACTGC TGACCAGCAT CCTGACCTAC CACGTAGTGG CCGGCCAAAC CAGCCCGGCC
AACGTCGTCG GCACCCGTCA GACCCTCCAG GGCGCCAGCG TGACGGTGAC CGGTCAGGGT
AACAGCCTCA AGGTCGGTAA CGCCGACGTC GTCTGTGGTG GGGTGTCTAC CGCCAACGCG
ACGGTGTACA TGATTGACAG CGTGCTAATG CCTCCGGCGT AA
 
Protein sequence
MKVKNTIAAT SFAAAGLAAL AVAVSPPAAA GDLVGPGCAE YAAANPTGPA SVQGMSQDPV 
AVAASNNPEL TTLTAALSGQ LNPQVNLVDT LNSGQYTVFA PTNAAFSKLP ASTIDELKTN
SSLLTSILTY HVVAGQTSPA NVVGTRQTLQ GASVTVTGQG NSLKVGNADV VCGGVSTANA
TVYMIDSVLM PPA