| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12861 |
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| Symbol | |
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| ID | 5223547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3164677 |
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| End bp | 3166269 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640607627 |
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| Product | integral membrane efflux protein efpA |
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| Protein accession | YP_001288790 |
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| Protein GI | 148824036 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 268 |
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| Plasmid unclonability p-value | 0.0945731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 227 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTC TCAACGACAC AGAGCGGGCG GTCCGTAACT GGACAGCCGG ACGCCCACAC
CGTCCGGCCC CGATGCGCCC GCCGCGCTCG GAGGAGACCG CTTCAGAGCG CCCCAGCAGG
TACTACCCGA CTTGGCTGCC CTCGCGCAGC TTTATCGCTG CGGTTATTGC TATCGGCGGG
ATGCAGCTGC TGGCGACCAT GGACAGCACC GTCGCCATCG TCGCGCTACC TAAGATTCAA
AACGAGCTGA GCTTGTCTGA TGCCGGCCGC AGCTGGGTGA TCACCGCCTA CGTGCTGACC
TTCGGCGGGC TGATGCTGCT CGGCGGCCGG CTTGGCGACA CCATCGGGCG CAAACGCACC
TTCATTGTTG GCGTTGCGCT ATTCACCATC TCGTCGGTGC TGTGCGCGGT CGCCTGGGAC
GAGGCGACGT TGGTGATCGC CCGGTTGTCC CAGGGTGTGG GGTCGGCCAT CGCATCTCCG
ACCGGTCTGG CGCTGGTGGC GACCACGTTC CCCAAGGGAC CTGCCCGCAA CGCCGCGACG
GCGGTGTTCG CCGCGATGAC CGCGATCGGG TCGGTGATGG GGCTGGTGGT CGGCGGAGCA
CTGACCGAGG TGTCATGGCG GTGGGCGTTC CTGGTGAACG TGCCGATCGG GCTGGTGATG
ATCTACCTGG CCCGCACCGC CCTACGGGAA ACCAACAAAG AACGGATGAA GCTCGACGCC
ACCGGGGCCA TACTGGCCAC GCTGGCATGC ACCGCGGCGG TTTTCGCCTT CTCGATCGGT
CCTGAAAAGG GCTGGATGTC AGGCATTACC ATCGGTTCGG GCCTGGTGGC CTTGGCGGCC
GCTGTCGCGT TTGTCATCGT GGAGCGCACT GCCGAGAACC CCGTCGTGCC GTTCCACTTG
TTCCGCGACC GCAACCGGTT GGTCACGTTC AGCGCGATCC TGTTGGCCGG CGGCGTCATG
TTCAGCCTGA CCGTCTGCAT CGGCCTGTAC GTGCAGGACA TCTTGGGCTA CAGCGCGCTA
CGCGCGGGCG TAGGTTTCAT CCCGTTCGTC ATCGCGATGG GAATCGGCCT AGGTGTGTCC
TCGCAGCTGG TGTCCCGGTT TTCGCCACGG GTGTTGACCA TCGGCGGCGG ATATCTGCTA
TTCGGCGCCA TGCTGTACGG CTCATTTTTC ATGCACCGTG GTGTGCCCTA CTTCCCCAAC
CTGGTCATGC CGATCGTCGT CGGCGGGATT GGCATCGGCA TGGCCGTCGT CCCGCTGACT
CTGTCGGCGA TCGCTGGCGT CGGCTTCGAC CAGATCGGTC CGGTATCGGC AATTGCGCTG
ATGCTGCAGA GCCTGGGCGG TCCGCTGGTG CTCGCCGTCA TCCAGGCTGT GATCACGTCG
CGCACGCTGT ACCTGGGCGG TACCACCGGT CCGGTGAAGT TCATGAACGA CGTGCAGTTG
GCCGCGCTTG ACCACGCCTA CACCTACGGC CTGCTGTGGG TGGCCGGAGC GGCCATCATC
GTCGGCGGTA TGGCGCTGTT TATCGGGTAT ACGCCGCAGC AGGTTGCCCA TGCGCAGGAG
GTCAAGGAAG CGATCGACGC CGGCGAGCTG TAA
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| Protein sequence | MTALNDTERA VRNWTAGRPH RPAPMRPPRS EETASERPSR YYPTWLPSRS FIAAVIAIGG
MQLLATMDST VAIVALPKIQ NELSLSDAGR SWVITAYVLT FGGLMLLGGR LGDTIGRKRT
FIVGVALFTI SSVLCAVAWD EATLVIARLS QGVGSAIASP TGLALVATTF PKGPARNAAT
AVFAAMTAIG SVMGLVVGGA LTEVSWRWAF LVNVPIGLVM IYLARTALRE TNKERMKLDA
TGAILATLAC TAAVFAFSIG PEKGWMSGIT IGSGLVALAA AVAFVIVERT AENPVVPFHL
FRDRNRLVTF SAILLAGGVM FSLTVCIGLY VQDILGYSAL RAGVGFIPFV IAMGIGLGVS
SQLVSRFSPR VLTIGGGYLL FGAMLYGSFF MHRGVPYFPN LVMPIVVGGI GIGMAVVPLT
LSAIAGVGFD QIGPVSAIAL MLQSLGGPLV LAVIQAVITS RTLYLGGTTG PVKFMNDVQL
AALDHAYTYG LLWVAGAAII VGGMALFIGY TPQQVAHAQE VKEAIDAGEL
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