Gene TBFG_12742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12742 
Symbol 
ID5223428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3053525 
End bp3054430 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content65% 
IMG OID640607508 
Productalanine, valine and leucine rich integral membrane protein 
Protein accessionYP_001288671 
Protein GI148823917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones372 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones202 
Fosmid unclonability p-value0.333827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCG TCGAATTCGC GACCATTCTG GCGCTGGGCG CCGCGTTGCT GGCCGGGATC 
GGGTATGTGA CACTTCAGCG GTCCGCGCGA CAGGTCACCG CTGAAGAATA TGTCGGCCAT
TTCACGTTGT TCCACCTCTC TTTGCGTCAC GCTCTGTGGT GGCTGGGCAG CCTGGCCGCA
GTCGCCAGTT TCACCCTGCA GGCCATTGCG CTGACGATGG GTTCGGTGGT GTTGGTGCAG
TCGCTGCAGG CCACCGCACT GTTGTTCGCG CTGCTGATCG ATGCTCGGTT GACTCATCAC
CGCTGTACTC CCAGGGAGTG GATGTGGGCG GTATTGCTGG CCGGCGCGGT GGCCGTCATC
GTCATGTCGG GCAACCCGGC GGCCGGCACT ACTCGGGCCC CCTTCTCGAC CTGGGCGGTG
GTTGCTGTCG TGGTTGTTCC GGCGGTGGTG CTTTGTGTGG TTGGTGCACG GATTGCCTCG
GGTTCGCTGT CCGCGGTGCT GCTGGCGGTG GCGTCGTCGG CAACGTTGGC GGTATTCACC
GTGCTGACCA AAGGGGTCGT GACGGAGCTC GGCGAGGGGT TCGCGACACT GATCCGGACC
CCCGAGTTGT ATGCCTGGAT CCTGGTTCTA CCGATCGGGC TGATGCTTCA GCAGTCGTCG
TTGCGGGTGG GCGCGCTAAC CGCCTCGTTG CCGACGATCA CCGTGGCGAG GCCGGTGATC
GCTTCGGTGC TGGGGATCAC CGTGCTCGAT GAGGTGCTGC ACACCGGCCG GGTGGCCCTG
GTCGCGCTGG TGGCAGCGGT AGTGGTGGTG GTTGTCGCGA CCGTAGCCTT GGCCCGTGAC
GAGGTCGCGA TGATGACGGT TTCCGCCGGC GAATTGGGGG CCGCGGGCCA GCTTGCGGTT
CGTTGA
 
Protein sequence
MASVEFATIL ALGAALLAGI GYVTLQRSAR QVTAEEYVGH FTLFHLSLRH ALWWLGSLAA 
VASFTLQAIA LTMGSVVLVQ SLQATALLFA LLIDARLTHH RCTPREWMWA VLLAGAVAVI
VMSGNPAAGT TRAPFSTWAV VAVVVVPAVV LCVVGARIAS GSLSAVLLAV ASSATLAVFT
VLTKGVVTEL GEGFATLIRT PELYAWILVL PIGLMLQQSS LRVGALTASL PTITVARPVI
ASVLGITVLD EVLHTGRVAL VALVAAVVVV VVATVALARD EVAMMTVSAG ELGAAGQLAV
R