| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12697 |
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| Symbol | |
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| ID | 5223383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 3010007 |
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| End bp | 3011923 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640607463 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001288626 |
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| Protein GI | 148823872 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 232 |
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| Plasmid unclonability p-value | 0.0245428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 213 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAC AGATCCGCGG GCCCGCTGAT CTGCAGCACC TTTCCCAGGC GCAGCTTCGG
GAGCTGGCCG CCGAGATCCG TGAGTTCCTG ATCCACAAGG TTGCCGCCAC GGGGGGGCAT
CTGGGGCCGA ACCTGGGAGT GGTGGAACTC ACCTTGGCGC TGCACCGGGT ATTCGACTCG
CCGCACGATC CGATCATCTT CGACACCGGT CACCAGGCCT ACGTCCACAA GATGTTGACC
GGACGCAGCC AGGACTTCGC AACCCTGCGT AAGAAGGGCG GGTTGTCGGG GTATCCGTCT
CGTGCCGAGA GCGAGCACGA CTGGGTGGAG TCGAGCCACG CCAGCGCGGC GCTGTCGTAC
GCGGACGGGT TGGCCAAGGC GTTCGAGTTG ACCGGACACC GCAACCGGCA TGTGGTCGCG
GTGGTCGGTG ACGGTGCGCT CACCGGCGGT ATGTGCTGGG AGGCGCTGAA CAATATCGCC
GCATCCCGCC GGCCGGTGAT TATCGTGGTC AACGACAATG GGCGCAGCTA CGCGCCCACA
ATCGGGGGCG TCGCCGACCA TCTGGCCACG CTGCGGCTGC AGCCGGCCTA CGAGCAGGCG
CTGGAGACGG GCCGCGACCT GGTGCGCGCG GTGCCGCTTG TCGGCGGTCT GTGGTTTCGA
TTCCTGCACA GCGTCAAGGC CGGCATCAAG GACTCGCTGT CGCCGCAGTT GCTGTTCACC
GACCTCGGGT TGAAGTACGT CGGCCCGGTC GACGGCCATG ACGAGCGGGC GGTGGAGGTC
GCGCTGCGCA GCGCGCGGCG CTTCGGTGCA CCGGTGATCG TGCACGTCGT CACCCGCAAG
GGCATGGGCT ACCCGCCGGC CGAGGCCGAC CAGGCCGAGC AGATGCATTC CACGGTCCCG
ATCGATCCGG CCACCGGACA AGCCACCAAG GTGGCCGGCC CAGGCTGGAC GGCGACCTTC
TCTGATGCAC TTATCGGCTA CGCCCAGAAA CGCCGTGACA TCGTGGCCAT TACCGCGGCC
ATGCCGGGCC CCACCGGGCT GACCGCGTTC GGGCAGCGCT TCCCGGATCG ATTGTTCGAC
GTCGGGATCG CCGAGCAACA CGCGATGACG TCGGCGGCCG GGTTGGCGAT GGGTGGGCTG
CACCCCGTGG TGGCGATCTA CTCGACGTTC CTGAACCGGG CGTTCGACCA GATCATGATG
GATGTGGCGC TGCACAAGCT GCCGGTCACC ATGGTGCTGG ACCGTGCCGG GATCACCGGT
AGCGACGGCG CCAGCCACAA CGGAATGTGG GACTTGTCGA TGCTGGGTAT CGTGCCCGGC
ATCCGGGTGG CAGCGCCCAG AGACGCCACC CGGTTGCGTG AAGAACTCGG CGAGGCGCTC
GACGTCGACG ACGGCCCGAC GGCGTTACGG TTCCCCAAAG GTGATGTGGG AGAAGATATT
TCGGCTTTGG AGCGGCGTGG AGGCGTGGAT GTGCTGGCGG CGCCCGCCGA TGGTTTGAAC
CACGACGTCC TGTTGGTGGC CATCGGCGCG TTCGCACCGA TGGCGTTGGC GGTGGCCAAG
CGGCTGCACA ACCAGGGGAT CGGTGTGACG GTGATCGACC CGCGCTGGGT GTTGCCGGTG
TCTGACGGTG TGCGCGAACT GGCGGTGCAG CACAAGCTGC TCGTCACGCT AGAGGACAAC
GGGGTCAACG GTGGGGCGGG GTCAGCGGTG TCGGCCGCGC TGCGGCGCGC GGAGATCGAC
GTGCCCTGCC GCGATGTCGG GTTGCCGCAG GAGTTCTACG AGCACGCGTC TCGAAGCGAG
GTGCTGGCCG ATCTGGGGCT TACCGACCAG GACGTGGCCC GGCGGATCAC CGGCTGGGTC
GCCGCGCTGG GTACCGGGGT GTGTGCGTCC GACGCGATTC CAGAACATCT CGACTAA
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| Protein sequence | MLQQIRGPAD LQHLSQAQLR ELAAEIREFL IHKVAATGGH LGPNLGVVEL TLALHRVFDS
PHDPIIFDTG HQAYVHKMLT GRSQDFATLR KKGGLSGYPS RAESEHDWVE SSHASAALSY
ADGLAKAFEL TGHRNRHVVA VVGDGALTGG MCWEALNNIA ASRRPVIIVV NDNGRSYAPT
IGGVADHLAT LRLQPAYEQA LETGRDLVRA VPLVGGLWFR FLHSVKAGIK DSLSPQLLFT
DLGLKYVGPV DGHDERAVEV ALRSARRFGA PVIVHVVTRK GMGYPPAEAD QAEQMHSTVP
IDPATGQATK VAGPGWTATF SDALIGYAQK RRDIVAITAA MPGPTGLTAF GQRFPDRLFD
VGIAEQHAMT SAAGLAMGGL HPVVAIYSTF LNRAFDQIMM DVALHKLPVT MVLDRAGITG
SDGASHNGMW DLSMLGIVPG IRVAAPRDAT RLREELGEAL DVDDGPTALR FPKGDVGEDI
SALERRGGVD VLAAPADGLN HDVLLVAIGA FAPMALAVAK RLHNQGIGVT VIDPRWVLPV
SDGVRELAVQ HKLLVTLEDN GVNGGAGSAV SAALRRAEID VPCRDVGLPQ EFYEHASRSE
VLADLGLTDQ DVARRITGWV AALGTGVCAS DAIPEHLD
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