| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12627 |
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| Symbol | |
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| ID | 5223309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 2948363 |
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| End bp | 2950105 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640607389 |
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| Product | PPE family protein |
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| Protein accession | YP_001288556 |
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| Protein GI | 148823802 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5651] PPE-repeat proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 203 |
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| Plasmid unclonability p-value | 0.00000062358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 219 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG CCGTTTTGCC GCCGGAGGTG AATTCGGCGC GCATATTCGC CGGTGCGGGC
CTGGGCCCAA TGCTGGCGGC GGCGTCGGCC TGGGACGGGT TGGCCGAGGA GTTGCATGCC
GCGGCGGGCT CGTTCGCGTC GGTGACCACC GGGTTGGCGG GCGACGCGTG GCATGGTCCG
GCGTCGCTGG CGATGACCCG CGCGGCCAGC CCGTATGTGG GGTGGTTGAA CACGGCGGCG
GGTCAGGCCG CGCAGGCGGC CGGCCAGGCG CGGCTAGCGG CGAGCGCGTT CGAGGCGACG
CTGGCGGCCA CCGTGTCTCC AGCGATGGTC GCGGCCAACC GGACACGGCT GGCGTCGCTG
GTGGCAGCCA ACTTGCTGGG CCAGAACGCC CCGGCGATCG CGGCCGCGGA GGCTGAATAC
GAGCAGATAT GGGCCCAGGA CGTGGCCGCG ATGTTCGGCT ATCACTCCGC CGCGTCGGCG
GTGGCCACGC AGCTGGCGCC TATTCAAGAG GGTTTGCAGC AGCAGCTGCA AAACGTGCTG
GCCCAGTTGG CTAGCGGGAA CCTGGGCAGC GGAAATGTGG GCGTCGGCAA CATCGGCAAC
GACAACATTG GCAACGCAAA CATCGGCTTC GGAAATCGAG GCGACGCCAA CATCGGCATC
GGGAATATCG GCGACAGAAA CCTCGGCATT GGGAACACCG GCAATTGGAA TATCGGCATC
GGCATCACCG GCAACGGACA AATCGGCTTC GGCAAGCCTG CCAACCCCGA CGTCTTGGTG
GTGGGCAACG GCGGCCCGGG AGTAACCGCG TTGGTCATGG GCGGCACCGA CAGCCTACTG
CCGCTGCCCA ACATCCCCTT ACTCGAGTAC GCTGCGCGGT TCATCACCCC CGTGCATCCC
GGATACACCG CTACGTTCCT GGAAACGCCA TCGCAGTTTT TCCCATTCAC CGGGCTGAAT
AGCCTGACCT ATGACGTCTC CGTGGCCCAG GGCGTAACGA ATCTGCACAC CGCGATCATG
GCGCAACTCG CGGCGGGAAA CGAAGTCGTC GTCTTCGGCA CCTCCCAAAG CGCCACGATA
GCCACCTTCG AAATGCGCTA TCTGCAATCC CTGCCAGCAC ACCTGCGTCC GGGTCTCGAC
GAATTGTCCT TTACGTTGAC CGGCAATCCC AACCGGCCCG ACGGTGGCAT TCTTACGCGT
TTTGGCTTCT CCATACCGCA GTTGGGTTTC ACATTGTCCG GCGCGACGCC CGCCGACGCC
TACCCCACCG TCGATTACGC GTTCCAGTAC GACGGCGTCA ACGACTTCCC CAAATACCCG
CTGAATGTCT TCGCGACCGC CAACGCGATC GCGGGCATCC TTTTCCTGCA CTCCGGGTTG
ATTGCGTTGC CGCCCGATCT TGCCTCGGGC GTGGTTCAAC CGGTGTCCTC ACCGGACGTC
CTGACCACCT ACATCCTGCT GCCCAGCCAA GATCTGCCGC TGCTGGTCCC GCTGCGTGCT
ATCCCCCTGC TGGGAAACCC GCTTGCCGAC CTCATCCAGC CGGACTTGCG GGTGCTCGTC
GAGTTGGGTT ATGACCGCAC CGCCCACCAG GACGTGCCCA GCCCGTTCGG ACTGTTTCCG
GACGTCGATT GGGCCGAGGT GGCCGCGGAC CTGCAGCAAG GCGCCGTGCA AGGCGTCAAC
GACGCCCTGT CCGGACTGGG GCTGCCGCCG CCGTGGCAGC CGGCGCTACC CCGACTTTTC
TAA
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| Protein sequence | MNFAVLPPEV NSARIFAGAG LGPMLAAASA WDGLAEELHA AAGSFASVTT GLAGDAWHGP
ASLAMTRAAS PYVGWLNTAA GQAAQAAGQA RLAASAFEAT LAATVSPAMV AANRTRLASL
VAANLLGQNA PAIAAAEAEY EQIWAQDVAA MFGYHSAASA VATQLAPIQE GLQQQLQNVL
AQLASGNLGS GNVGVGNIGN DNIGNANIGF GNRGDANIGI GNIGDRNLGI GNTGNWNIGI
GITGNGQIGF GKPANPDVLV VGNGGPGVTA LVMGGTDSLL PLPNIPLLEY AARFITPVHP
GYTATFLETP SQFFPFTGLN SLTYDVSVAQ GVTNLHTAIM AQLAAGNEVV VFGTSQSATI
ATFEMRYLQS LPAHLRPGLD ELSFTLTGNP NRPDGGILTR FGFSIPQLGF TLSGATPADA
YPTVDYAFQY DGVNDFPKYP LNVFATANAI AGILFLHSGL IALPPDLASG VVQPVSSPDV
LTTYILLPSQ DLPLLVPLRA IPLLGNPLAD LIQPDLRVLV ELGYDRTAHQ DVPSPFGLFP
DVDWAEVAAD LQQGAVQGVN DALSGLGLPP PWQPALPRLF
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