| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12620 |
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| Symbol | |
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| ID | 5223302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | + |
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| Start bp | 2941705 |
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| End bp | 2943276 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640607382 |
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| Product | spermidine synthase |
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| Protein accession | YP_001288549 |
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| Protein GI | 148823795 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 328 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 204 |
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| Fosmid unclonability p-value | 0.737758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCA CCCGGCAGGC GGGCGAAGCC ACCGAAGCTT CGGTACGGTG GCGGGCCGTG
CTGCTGGCCG CGGTCGCGGC GTGCGCGGCC TGCGGTCTCG TTTACGAGCT CGCGCTGCTG
ACACTGGCGG CGAGCCTGAA CGGCGGCGGG ATCGTGGCCA CCTCCCTGAT CGTCGCGGGC
TACATAGCCG CGCTGGGAGC AGGCGCCTTG CTGATCAAGC CGCTACTTGC ACACGCGGCC
ATCGCGTTCA TCGCCGTGGA GGCGGTGCTG GGCATCATCG GCGGATTGTC CGCGGCGGCG
CTGTATGCGG CGTTCGCGTT CCTGGACGAG CTCGACGGGT CGACGCTGGT TCTTGCGGTG
GGCACCGCCC TGATCGGCGG GCTGGTCGGC GCCGAGGTGC CGCTGCTGAT GACGCTGTTG
CAGCGCGGCC GCGTGGCAGG GGCCGCCGAT GCCGGACGCA CCCTGGCCAA CCTCAACGCG
GCCGACTATC TGGGCGCGTT GGTCGGCGGG CTGGCCTGGC CATTCCTGCT GCTGCCGCAG
TTAGGGATGA TCCGCGGTGC GGCGGTCACC GGCATCGTCA ATCTGGCGGC CGCCGGGGTT
GTGTCGATCT TCCTGCTGCG CCACGTCGTG TCCGGCCGGC AACTGGTGAC CGCCTTATGC
GCGCTCGCCG CGGCGCTCGG GCTGATCGCC ACACTGCTGG TGCATTCCCA CGACATTGAG
ACCACCGGCC GCCAACAGCT CTACGCCGAC CCGATCATCG CCTACCGACA CAGCGCCTAC
CAGGAAATCG TGGTCACCCG CCGCGGCGAT GACCTGCGCC TCTACCTGGA CGGAGGTTTG
CAGTTCTGCA CCCGCGACGA ATACCGCTAC ACCGAAAGCC TGGTCTACCC GGCAGTCTCC
GATGGCGCGC GTTCGGTGCT GGTGCTCGGT GGCGGCGACG GACTGGCAGC CCGCGAACTG
CTGCGCCAAC CCGGCATCGA GCAGATCGTG CAGGTGGAAC TCGACCCCGC GGTCATCGAA
CTGGCGCGCA CCACCCTGCG CGACGTCAAC GCCGGTTCGC TGGACAACCC GCGCGTACAC
GTCGTGATCG ACGACGCCAT GAGCTGGCTA CGCGGCGCCG CGGTCCCCCC GGCTGGCTTC
GACGCAGTGA TCGTCGACCT TCGCGACCCC GATACTCCCG TGCTGGGTCG GCTGTATTCC
ACCGAGTTCT ACGCACTCGC CGCCCGCGCG CTCGCGCCCG GCGGGCTCAT GGTCGTGCAG
GCAGGCAGCC CGTATTCGAC CCCGACTGCG TTCTGGCGCA TCATCTCCAC GATCCGGTCC
GCCGGGTATG CCGTCACGCC CTACCACGTG CACGTGCCCA CCTTCGGCGA CTGGGGATTC
GCCCTGGCAC GCCTTACAGA CATCGCGCCC ACCCCCGCTG TGCCGAGCAC TGCCCCTGCA
CTGCGCTTCC TGGACCAACA GGTGCTCGAG GCCGCGACCG TGTTTTCCGG CGACATCCGG
CCCCGCACGT TGGACCCGTC GACCCTGGAC AATCCGCACA TTGTTGAGGA CATGCGGCAC
GGCTGGGACT AG
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| Protein sequence | MTSTRQAGEA TEASVRWRAV LLAAVAACAA CGLVYELALL TLAASLNGGG IVATSLIVAG
YIAALGAGAL LIKPLLAHAA IAFIAVEAVL GIIGGLSAAA LYAAFAFLDE LDGSTLVLAV
GTALIGGLVG AEVPLLMTLL QRGRVAGAAD AGRTLANLNA ADYLGALVGG LAWPFLLLPQ
LGMIRGAAVT GIVNLAAAGV VSIFLLRHVV SGRQLVTALC ALAAALGLIA TLLVHSHDIE
TTGRQQLYAD PIIAYRHSAY QEIVVTRRGD DLRLYLDGGL QFCTRDEYRY TESLVYPAVS
DGARSVLVLG GGDGLAAREL LRQPGIEQIV QVELDPAVIE LARTTLRDVN AGSLDNPRVH
VVIDDAMSWL RGAAVPPAGF DAVIVDLRDP DTPVLGRLYS TEFYALAARA LAPGGLMVVQ
AGSPYSTPTA FWRIISTIRS AGYAVTPYHV HVPTFGDWGF ALARLTDIAP TPAVPSTAPA
LRFLDQQVLE AATVFSGDIR PRTLDPSTLD NPHIVEDMRH GWD
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