| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12611 |
|---|
| Symbol | |
|---|
| ID | 5223293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 2934868 |
|---|
| End bp | 2936499 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640607373 |
|---|
| Product | PE-PGRS family protein |
|---|
| Protein accession | YP_001288540 |
|---|
| Protein GI | 148823786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 264 |
|---|
| Plasmid unclonability p-value | 0.0987331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 213 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTG TCACGGCAGC TCCAGAGATG CTGGCGACGG CGGCGCAGAA TGTCGCGAAT
ATCGGCACAT CGCTGAGTGC GGCAAACGCG ACGGCAGCGG CGTCCACGAC CTCGGTGCTG
GCGGCCGGAG CCGACGAGGT ATCGCAGGCT ATCGCAAGGC TGTTCAGTGA TTACGCCACG
CACTATCAGT CGCTGAACGC TCAAGCCGCG GCATTTCATC ACAGCTTCGT GCAAACGTTG
AACGCCGCCG GTGGCGCCTA TTCGAGCGCC GAGGCGGCCA ACGCTTCGGC GCAGGCGTTG
GAACAGAATC TGTTGGCCGT GATCAATGCG CCCGCCCAGG CGTTGTTCGG GCGTCCCCTG
ATCGGCAATG GCGCGAATGG AACAGCGGCC AGCCCCAACG GCGGTGATGG TGGGATTTTG
TACGGCAACG GCGGCAACGG CTTCTCCCAA ACGACCGCCG GGGTGGCCGG CGGCGCCGGT
GGTTCCGCGG GCCTGATCGG CAACGGCGGC AATGGTGGCG CCGGTGGGGC CGGTGCTGCC
GGCGGGGCCG GCGGCGCCGG CGGATGGCTG CTCGGCAACG GTGGCGCCGG CGGTCCCGGC
GGCCCAACGG ACGTTCCTGC CGGCACAGGT GGAGCCGGCG GGGCCGGCGG CGACGCCCCA
TTGATCGGCT GGGGCGGCAA CGGCGGGCCC GGCGGTTTCG CTGCTTTTGG AAACGGTGGG
GCCGGCGGCA ACGGCGGCGC CAGCGGTTCG CTCTTTGGCG TCGGCGGCGC CGGCGGCGTC
GGCGGATCGA GCGAAGACGT CGGCGGCACC GGCGGGGCCG GCGGCGCTGG CCGCGGTCTA
TTCCTTGGCC TGGGCGGTGA TGGCGGCGCC GGCGGCACCA GCAACAACAA CGGCGGTGAC
GGTGGCGCCG GCGGCACCGC GGGAGGTCGA TTGTTCAGCC TGGGCGGTGA CGGTGGCAAC
GGTGGTGCCG GTACCGCAAT CGGATCCAAC GCCGGTGACG GTGGCGCCGG CGGTGACAGC
AGCGCCCTGA TCGGCTACGC CCAGGGCGGC TCCGGCGGCC TCGGCGGCTT CGGCGAAAGT
ACCGGCGGCG ACGGCGGCCT GGGCGGCGCC GGCGCTGTGC TCATCGGCAC GGGCGTCGGC
GGTTTCGGCG GCCTCGGTGG CGGCTCCAAC GGCACCGGGG GCGCGGGCGG CGCGGGCGGC
ACGGGCGCCA CGCTGATCGG CCTGGGCGCC GGCGGCGGCG GCGGCATCGG CGGGTTCGCC
GTCAACGTGG GCAACGGCGT CGGCGGTCTG GGCGGCCAGG GCGGCCAGGG CGCCGCGCTG
ATCGGCCTGG GCGCCGGCGG TGCCGGCGGT GCCGGCGGCG CCACAGTCGT TGGACTTGGT
GGCAATGGCG GTGACGGCGG TGACGGTGGC GGCCTGTTTA GTATCGGCGT CGGTGGGGAC
GGCGGCAACG CCGGCAACGG CGCCATGCCT GCCAATGGCG GCAACGGCGG CAACGCCGGG
GTCATTGCCA ACGGCTCCTT TGCCCCGTCG TTCGTCGGCT TCGGCGGCAA CGGCGGCAAC
GGCGTCAATG GCGGCACCGG CGGCAGCGGC GGGATCCTTT TTGGCGCCAA CGGCGCGAAC
GGACCGTCGT AG
|
|---|
| Protein sequence | MSFVTAAPEM LATAAQNVAN IGTSLSAANA TAAASTTSVL AAGADEVSQA IARLFSDYAT
HYQSLNAQAA AFHHSFVQTL NAAGGAYSSA EAANASAQAL EQNLLAVINA PAQALFGRPL
IGNGANGTAA SPNGGDGGIL YGNGGNGFSQ TTAGVAGGAG GSAGLIGNGG NGGAGGAGAA
GGAGGAGGWL LGNGGAGGPG GPTDVPAGTG GAGGAGGDAP LIGWGGNGGP GGFAAFGNGG
AGGNGGASGS LFGVGGAGGV GGSSEDVGGT GGAGGAGRGL FLGLGGDGGA GGTSNNNGGD
GGAGGTAGGR LFSLGGDGGN GGAGTAIGSN AGDGGAGGDS SALIGYAQGG SGGLGGFGES
TGGDGGLGGA GAVLIGTGVG GFGGLGGGSN GTGGAGGAGG TGATLIGLGA GGGGGIGGFA
VNVGNGVGGL GGQGGQGAAL IGLGAGGAGG AGGATVVGLG GNGGDGGDGG GLFSIGVGGD
GGNAGNGAMP ANGGNGGNAG VIANGSFAPS FVGFGGNGGN GVNGGTGGSG GILFGANGAN
GPS
|
|---|
| |