| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12539 |
|---|
| Symbol | |
|---|
| ID | 5223220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2847427 |
|---|
| End bp | 2848653 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640607300 |
|---|
| Product | lipoprotein lppS |
|---|
| Protein accession | YP_001288468 |
|---|
| Protein GI | 148823714 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 96 |
|---|
| Plasmid unclonability p-value | 1.43439e-50 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 167 |
|---|
| Fosmid unclonability p-value | 0.00210001 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGG TGGGGATTGC AGCTCAGGCG GGTAGGACCA GGGTTCGGAG AGCCTGGTTA
ACCGCGCTGA TGATGACCGC CGTGATGATC GGTGCCGTCG CATGCGGCAG CGGCCGCGGA
CCCGCACCGA TCAAGGTCAT CGCGGACAAG GGCACGCCGT TCGCCGATCT GCTGGTGCCC
AAGCTCACCG CGTCGGTCAC CGACGGCGCC GTCGGCGTCA CCGTGGATGC ACCGGTGTCG
GTGACCGCCG CCGACGGTGT GCTGGCGGCC GTCACCATGG TCAACGACAA CGGCAGGCCG
GTGGCCGGTC GACTCAGCCC CGACGGACTG CGCTGGTCGA CCACTGAGCA GCTCGGCTAC
AACAGGCGCT ACACGCTGAA CGCGACGGCG CTTGGACTGG GTGGCGCGGC GACCCGCCAG
CTGACCTTCC AGACCAGTTC CCCCGCGCAC CTGACCATGC CCTACGTCAT GCCCGGTGAT
GGGGAGGTCG TGGGTGTCGG CGAGCCGGTG GCGATCCGAT TCGACGAGAA CATCGCTGAC
CGGGGCGCGG CCGAGAAGGC CATCAAGATC ACCACCAACC CGCCCGTGGA GGGCGCGTTC
TACTGGCTGA ATAACCGTGA AGTGCGTTGG CGCCCAGAGC ATTTCTGGAA GCCAGGTACG
GCCGTTGATG TGGCGGTCAA CACCTACGGC GTCGACTTGG GCGAGGGAAT GTTCGGCGAG
GACAACGTGC AGACGCACTT CACCATCGGC GACGAGGTGA TCGCGACCGC CGACGACAAC
ACCAAGATAC TGACCGTGCG GGTGAATGGC GAGGTCGTAA AGTCCATGCC GACGTCGATG
GGCAAGGACA GCACCCCGAC GGCCAACGGC ATATACATCG TCGGCTCGCG GTACAAGCAC
ATCATCATGG ACTCGTCCAC CTACGGCGTA CCCGTCAACT CGCCCAACGG ATATCGCACC
GATGTCGACT GGGCCACCCA GATCTCCTAC AGCGGTGTCT TCGTGCACTC AGCGCCGTGG
TCGGTGGGGG CTCAGGGCCA CACCAACACC AGCCATGGCT GCCTGAACGT CAGCCCGAGC
AACGCGCAGT GGTTCTACGA CCATGTCAAG CGCGGCGACA TCGTCGAGGT GGTCAATACC
GTGGGTGGCA CCCTGCCGGG GATCGACGGG CTCGGCGATT GGAACATTCC GTGGGACCAG
TGGCGCGCCG GTAACGCCAA GGCGTAA
|
|---|
| Protein sequence | MPKVGIAAQA GRTRVRRAWL TALMMTAVMI GAVACGSGRG PAPIKVIADK GTPFADLLVP
KLTASVTDGA VGVTVDAPVS VTAADGVLAA VTMVNDNGRP VAGRLSPDGL RWSTTEQLGY
NRRYTLNATA LGLGGAATRQ LTFQTSSPAH LTMPYVMPGD GEVVGVGEPV AIRFDENIAD
RGAAEKAIKI TTNPPVEGAF YWLNNREVRW RPEHFWKPGT AVDVAVNTYG VDLGEGMFGE
DNVQTHFTIG DEVIATADDN TKILTVRVNG EVVKSMPTSM GKDSTPTANG IYIVGSRYKH
IIMDSSTYGV PVNSPNGYRT DVDWATQISY SGVFVHSAPW SVGAQGHTNT SHGCLNVSPS
NAQWFYDHVK RGDIVEVVNT VGGTLPGIDG LGDWNIPWDQ WRAGNAKA
|
|---|
| |