Gene TBFG_12534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12534 
Symbol 
ID5223215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2841874 
End bp2843121 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID640607295 
Producttransposase 
Protein accessionYP_001288463 
Protein GI148823709 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones325 
Plasmid unclonability p-value0.922715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones165 
Fosmid unclonability p-value0.00121453 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCTCTT CTCATCTTAT CGACGCCGAG CAGCTTCTGG CTGACCAACT CGCACAGGCG 
AGCCCGGATC TGCTGCGCGG GCTGCTCTCG ACGTTCATCG CCGCCTTGAT GGGGGCTGAA
GCCGACGCCC TGTGCGGGGC GGGCTACCGC GAACGCAGCG ATGAGCGGTC CAATCAGCGC
AACGGCTACC GCCACCGTGA TTTCGACACC CGTGCCGCAA CCATCGACGT CGCGATCCCC
AAGCTGCGCC AGGGCAGCTA TTTCCCGGAC TGGCTGCTGC AGCGCCGCAA GCGAGCTGAA
CGCGCACTGA CCAGCGTGGT GGCGACCTGC TACCTGCTGG GAGTATCCAC TCGCCGGATG
GAGCGCCTGG TCGAAACACT TGGTGTGACA AAGCTTTCCA AGTCGCAAGT GTCGATCATG
GCCAAAGAGC TCGACGAAGC CGTAGAGGCG TTTCGGACCC GCCCGCTCGA TGCCGGCCCG
TATACCTTCC TCGCCGCCGA CGCCCTGGTG CTCAAGGTGC GCGAGGCAGG CCGCGTCGTC
GGGGTGCACA CCTTGATCGC CACCGGCGTC AACGCCGAGG GCTACCGAGA GATCCTGGGC
ATCCAGGTCA CCTCCGCCGA GGACGGGGCC GGCTGGCTGG CGTTCTTCCG CGACCTGGTC
GCCCGCGGCC TGTCCGGGGT CGCGCTGGTC ACCAGCGACG CCCACGCCGG CCTGGTGGCC
GCGATCGGCG CCACCCTGCC CGCAGCGGCC TGGCAGCGCT GCAGAACCCA CTACGCAGCC
AATCTGATGG CAGCCACCCC GAAGCCCTCC TGGCCGTGGG TGCGCACCCT GCTGCACTCC
ATCTACGACC AGCCCGACGC CGAATCAGTT GTTGCCCAAT ATGATCGGGT ACTCGACGCT
CTGACCGACA AACTCCCCGC GGTGGCCGAG CACCTCGACA CCGCCCGCAC CGACCTGCTG
GCGTTCACCG CCTTCCCCAA GAAGATCTGG CGCCAAATCT GGTCCAACAA CCCCCAGGAA
CGCCTCAACC GAGAGGTACG ACGCCGAACC GACGTCGTGG GCATCTTCCC CGACCGCGCC
TCGATCATCC GCCTCGTCGG AGCCGTCCTC GCCGAACAAC ACGACGAATG GATCGAAGGA
CGGCGCTACC TGGGCCTCGA GGTCCTCACC CGAGCCCGAG CAGCACTGAC CAGCACCGAA
GAACCCGCCA AGCAGCAAAC CACCAACACC CCAGCACTGA CCACCTAG
 
Protein sequence
MTSSHLIDAE QLLADQLAQA SPDLLRGLLS TFIAALMGAE ADALCGAGYR ERSDERSNQR 
NGYRHRDFDT RAATIDVAIP KLRQGSYFPD WLLQRRKRAE RALTSVVATC YLLGVSTRRM
ERLVETLGVT KLSKSQVSIM AKELDEAVEA FRTRPLDAGP YTFLAADALV LKVREAGRVV
GVHTLIATGV NAEGYREILG IQVTSAEDGA GWLAFFRDLV ARGLSGVALV TSDAHAGLVA
AIGATLPAAA WQRCRTHYAA NLMAATPKPS WPWVRTLLHS IYDQPDAESV VAQYDRVLDA
LTDKLPAVAE HLDTARTDLL AFTAFPKKIW RQIWSNNPQE RLNREVRRRT DVVGIFPDRA
SIIRLVGAVL AEQHDEWIEG RRYLGLEVLT RARAALTSTE EPAKQQTTNT PALTT