Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12534 |
Symbol | |
ID | 5223215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2841874 |
End bp | 2843121 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640607295 |
Product | transposase |
Protein accession | YP_001288463 |
Protein GI | 148823709 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 325 |
Plasmid unclonability p-value | 0.922715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 165 |
Fosmid unclonability p-value | 0.00121453 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCTCTT CTCATCTTAT CGACGCCGAG CAGCTTCTGG CTGACCAACT CGCACAGGCG AGCCCGGATC TGCTGCGCGG GCTGCTCTCG ACGTTCATCG CCGCCTTGAT GGGGGCTGAA GCCGACGCCC TGTGCGGGGC GGGCTACCGC GAACGCAGCG ATGAGCGGTC CAATCAGCGC AACGGCTACC GCCACCGTGA TTTCGACACC CGTGCCGCAA CCATCGACGT CGCGATCCCC AAGCTGCGCC AGGGCAGCTA TTTCCCGGAC TGGCTGCTGC AGCGCCGCAA GCGAGCTGAA CGCGCACTGA CCAGCGTGGT GGCGACCTGC TACCTGCTGG GAGTATCCAC TCGCCGGATG GAGCGCCTGG TCGAAACACT TGGTGTGACA AAGCTTTCCA AGTCGCAAGT GTCGATCATG GCCAAAGAGC TCGACGAAGC CGTAGAGGCG TTTCGGACCC GCCCGCTCGA TGCCGGCCCG TATACCTTCC TCGCCGCCGA CGCCCTGGTG CTCAAGGTGC GCGAGGCAGG CCGCGTCGTC GGGGTGCACA CCTTGATCGC CACCGGCGTC AACGCCGAGG GCTACCGAGA GATCCTGGGC ATCCAGGTCA CCTCCGCCGA GGACGGGGCC GGCTGGCTGG CGTTCTTCCG CGACCTGGTC GCCCGCGGCC TGTCCGGGGT CGCGCTGGTC ACCAGCGACG CCCACGCCGG CCTGGTGGCC GCGATCGGCG CCACCCTGCC CGCAGCGGCC TGGCAGCGCT GCAGAACCCA CTACGCAGCC AATCTGATGG CAGCCACCCC GAAGCCCTCC TGGCCGTGGG TGCGCACCCT GCTGCACTCC ATCTACGACC AGCCCGACGC CGAATCAGTT GTTGCCCAAT ATGATCGGGT ACTCGACGCT CTGACCGACA AACTCCCCGC GGTGGCCGAG CACCTCGACA CCGCCCGCAC CGACCTGCTG GCGTTCACCG CCTTCCCCAA GAAGATCTGG CGCCAAATCT GGTCCAACAA CCCCCAGGAA CGCCTCAACC GAGAGGTACG ACGCCGAACC GACGTCGTGG GCATCTTCCC CGACCGCGCC TCGATCATCC GCCTCGTCGG AGCCGTCCTC GCCGAACAAC ACGACGAATG GATCGAAGGA CGGCGCTACC TGGGCCTCGA GGTCCTCACC CGAGCCCGAG CAGCACTGAC CAGCACCGAA GAACCCGCCA AGCAGCAAAC CACCAACACC CCAGCACTGA CCACCTAG
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Protein sequence | MTSSHLIDAE QLLADQLAQA SPDLLRGLLS TFIAALMGAE ADALCGAGYR ERSDERSNQR NGYRHRDFDT RAATIDVAIP KLRQGSYFPD WLLQRRKRAE RALTSVVATC YLLGVSTRRM ERLVETLGVT KLSKSQVSIM AKELDEAVEA FRTRPLDAGP YTFLAADALV LKVREAGRVV GVHTLIATGV NAEGYREILG IQVTSAEDGA GWLAFFRDLV ARGLSGVALV TSDAHAGLVA AIGATLPAAA WQRCRTHYAA NLMAATPKPS WPWVRTLLHS IYDQPDAESV VAQYDRVLDA LTDKLPAVAE HLDTARTDLL AFTAFPKKIW RQIWSNNPQE RLNREVRRRT DVVGIFPDRA SIIRLVGAVL AEQHDEWIEG RRYLGLEVLT RARAALTSTE EPAKQQTTNT PALTT
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