Gene TBFG_12533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12533 
Symbol 
ID5223213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2840475 
End bp2841122 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID640607293 
Productoligoribonuclease 
Protein accessionYP_001288462 
Protein GI148823708 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones449 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones175 
Fosmid unclonability p-value0.00601507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAAGACG AACTGGTGTG GATCGACTGC GAGATGACCG GGCTCGATCT GGGTTCGGAC 
AAGCTGATCG AGATAGCCGC CCTGGTCACC GATGCCGATC TGAACATTCT CGGCGACGGG
GTGGACGTGG TGATGCACGC CGACGACGCC GCGCTGTCGG GCATGATCGA CGTGGTCGCC
GAGATGCACT CGCGGTCGGG GCTGATCGAC GAGGTGAAGG CATCCACGGT CGACCTAGCG
ACCGCCGAGG CCATGGTGCT CGACTACATC AACGAGCACG TCAAGCAGCC CAAGACCGCC
CCACTGGCCG GCAACTCGAT CGCCACCGAC CGCGCGTTCA TCGCCCGCGA CATGCCCACG
CTGGACTCGT TTCTGCACTA CCGAATGATC GACGTCAGCT CGATCAAGGA ACTGTGCCGG
CGCTGGTATC CGCGGATCTA CTTCGGCCAG CCGCCCAAGG GGCTGACGCA CCGGGCGCTG
GCCGACATCC ACGAATCCAT CCGCGAACTG CGGTTCTACC GCCGCACCGC GTTCGTGCCC
CAGCCCGGCC CTTCTACCAG CGAAATCGCG GCCGTCGTCG CCGAGCTTTC CGACGGGGCG
GGCGCGCAGG AAGAAACAGA TTCGGCCGAG GCGCCCCAGA GCGGTTAA
 
Protein sequence
MQDELVWIDC EMTGLDLGSD KLIEIAALVT DADLNILGDG VDVVMHADDA ALSGMIDVVA 
EMHSRSGLID EVKASTVDLA TAEAMVLDYI NEHVKQPKTA PLAGNSIATD RAFIARDMPT
LDSFLHYRMI DVSSIKELCR RWYPRIYFGQ PPKGLTHRAL ADIHESIREL RFYRRTAFVP
QPGPSTSEIA AVVAELSDGA GAQEETDSAE APQSG