| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12526 |
|---|
| Symbol | |
|---|
| ID | 5223206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2832442 |
|---|
| End bp | 2833188 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640607286 |
|---|
| Product | succinyl-CoA:3-ketoacid-coenzyme A transferase alpha subunit scoA |
|---|
| Protein accession | YP_001288455 |
|---|
| Protein GI | 148823701 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 352 |
|---|
| Plasmid unclonability p-value | 0.399784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 186 |
|---|
| Fosmid unclonability p-value | 0.0529319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGG TGGTGGCCAC CGCCGCGGAG GCGGTCGCAG ACATAGCCAA CGGGTCGTCG
CTTGCGGTTG GTGGATTCGG GCTTTGCGGC ATCCCCGAAG CACTGATCGC AGCGTTGGTG
GATAGCGGTG TCACCGACCT GGAAACAGTC TCGAACAACT GCGGAATCGA CGGTGTTGGT
CTGGGACTAT TGTTGCAACA CAAGCGAATT CGCCGGACAG TCTCCTCCTA CGTGGGGGAG
AACAAGGAGT TCGCCCGCCA GTTCCTCGCG GGCGAGCTCG AGGTGGAACT GACCCCGCAG
GGCACGCTGG CCGAGCGGTT GCGGGCCGGA GGGATGGGCA TACCGGCCTT CTATACACCG
GCAGGGGTCG GTACCCAGGT CGCCGACGGC GGGTTGCCGT GGCGCTACGA CGCCTCGGGC
GGGGTGGCGG TGGTGTCGCC GGCCAAGGAG ACTCGGGAGT TCGATGGTGT CACCTATGTC
CTCGAGCGGG GGATCCGGAC CGACTTCGCA CTGGTGCATG CCTGGCAGGG GGACCGGCAC
GGCAACCTGA TGTACCGCCA CGCCGCGGCC AACTTCAACC CGGAGTGCGC ATCCGCAGGC
AGGATCACGA TCGCCGAGGT CGAGCACTTG GTCGAGCCGG GTGAGATCGA CCCTGCCACC
GTACACACCC CGGGCGTGTT TGTGCACCGG GTGGTTCATG TGCCCAACCC CGCCAAGAAG
ATCGAGAGGG AGACGGTGCG GCAATGA
|
|---|
| Protein sequence | MDKVVATAAE AVADIANGSS LAVGGFGLCG IPEALIAALV DSGVTDLETV SNNCGIDGVG
LGLLLQHKRI RRTVSSYVGE NKEFARQFLA GELEVELTPQ GTLAERLRAG GMGIPAFYTP
AGVGTQVADG GLPWRYDASG GVAVVSPAKE TREFDGVTYV LERGIRTDFA LVHAWQGDRH
GNLMYRHAAA NFNPECASAG RITIAEVEHL VEPGEIDPAT VHTPGVFVHR VVHVPNPAKK
IERETVRQ
|
|---|
| |