| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12517 |
|---|
| Symbol | |
|---|
| ID | 5223197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2822076 |
|---|
| End bp | 2823257 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640607277 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_001288446 |
|---|
| Protein GI | 148823692 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 235 |
|---|
| Plasmid unclonability p-value | 0.000000112525 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 221 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTG AGGACAGCAT CAGGTCTTTC CCGGTGCCCG ACCTCGGCGA GGGACTGCAG
GAAGTGACGG TGACGTGTTG GAGCGTCGCC GTCGGCGACG ATGTGGAGAT CAACCAGACG
CTGTGTTCGG TGGAGACCGC CAAGGCCGAG GTCGAAATCC CCAGCCCGTA TGCCGGCCGG
ATCGTCGAGT TAGGCGGCGC CGAAGGCGAT GTGCTCAAAG TGGGCGCGGA GCTAGTTCGG
ATCGACACCG GGCCCACGGC AGTTGCGCAG CCTAACGGTG AAGGAGCGGT CCCCACGTTG
GTCGGCTACG GTGCCGACGC CGCGATCGAA ACCAGTAGAC GGACAAGCCG GCCGCTGGCG
GCACCGGTAG TGCGCAAGCT GGCCAAAGAG TTGGCGGTCG ACCTGGCCGC ATTGCAGCGT
GGGTCGGGCG CCGGCGGTGT GATCACCCGG GCCGATGTGC TGGCCGCTGC TCGAGGCGGC
GTCGGAGCCG GGCCGGACGT GCGGCCGGTC CACGGCGTGC ACGCGCGGAT GGCCGAAAAA
ATGACGTTGT CCCACAAGGA GATTCCGACC GCAAAGGCCA GCGTTGAGGT AATTTGCGCC
GAACTGCTGC GGCTGCGCGA CCGGTTCGTT TCGGCGGCGC CCGAGATTAC ACCGTTCGCG
CTGACGCTGC GGCTGCTGGT TATTGCATTG AAACACAACG TAATTCTCAA CTCGACGTGG
GTCGACTCGG GCGAAGGCCC GCAAGTACAC GTGCATCGCG GTGTGCATCT GGGGTTCGGC
GCGGCCACTG AGCGTGGATT GCTGGTGCCG GTGGTGACCG ACGCCCAGGA CAAGAACACC
CGCGAACTTG CCTCCCGCGT AGCGGAATTA ATCACCGGCG CACGTGAAGG CACTCTCACA
CCCGCGGAGC TGCGCGGTTC GACGTTCACG GTGTCGAACT TCGGGGCGCT GGGAGTCGAC
GACGGCGTGC CGGTGATCAA CCATCCCGAA GCGGCGATCC TGGGTCTGGG GGCGATCAAG
CCGCGCCCGG TGGTCGTCGG CGGCGAGGTT GTCGCACGGC CGACGATGAC GTTGACTTGT
GTGTTCGACC ACCGCGTTGT CGATGGTGCT CAGGTGGCCC AGTTCATGTG TGAGCTGCGG
GATCTGATCG AGTCGCCGGA GACCGCGCTG TTGGATCTGT AG
|
|---|
| Protein sequence | MSGEDSIRSF PVPDLGEGLQ EVTVTCWSVA VGDDVEINQT LCSVETAKAE VEIPSPYAGR
IVELGGAEGD VLKVGAELVR IDTGPTAVAQ PNGEGAVPTL VGYGADAAIE TSRRTSRPLA
APVVRKLAKE LAVDLAALQR GSGAGGVITR ADVLAAARGG VGAGPDVRPV HGVHARMAEK
MTLSHKEIPT AKASVEVICA ELLRLRDRFV SAAPEITPFA LTLRLLVIAL KHNVILNSTW
VDSGEGPQVH VHRGVHLGFG AATERGLLVP VVTDAQDKNT RELASRVAEL ITGAREGTLT
PAELRGSTFT VSNFGALGVD DGVPVINHPE AAILGLGAIK PRPVVVGGEV VARPTMTLTC
VFDHRVVDGA QVAQFMCELR DLIESPETAL LDL
|
|---|
| |