Gene TBFG_12488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12488 
Symbol 
ID5223167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2780329 
End bp2781513 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID640607247 
Productesterase/lipase lipP 
Protein accessionYP_001288417 
Protein GI148823663 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones420 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones213 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC CTGACATCAA GGGCTCGTGC GCGTCGGAGT TCACCAAGGT ACGCGACGCG 
TTCGAGCGCA ACTTTGTGCT GCGCAACGAG GTCGGCGCGG CCGTCGCGGT GTGGGTCGAC
GGGGATCTTG TCGTCAACCT GTGGGGCGGC TCCGCCGACG CCGGCGGTAC CCGGCCCTGG
CAGCACGACA CGCTGGCCAC CGTGCTGTCC GGTACCAAGG CACTAACGGC CACGTGTGTG
CATCAGCTCG TCGATCGCGG TGAGCTTGAC CTGCATGCGC CGGTGGCACG CTACTGGCCC
GAGTTCGGAC AGGCGGGTAA GCAGGCCATC ACGCTGGCGA TGGTGATGAG CCACCGCTCC
GGGGCGATCG GGCCGCGCGG ACGGCTGGGC TGGGAGCAGG TCGCCGATTG GGATTTTGTC
TGCGAGCAAC TGGCCGCCGC CGAACCGTGG TGGCAGCCGG GTGCCGCGCA GGGCTACCAC
ATGACCACCT TCGGTTTCAT CCTCGGCGAA GTGTTCCGCC GCGTCACAGG CCGTACGGTC
GGTCAATACC TGCGTACCGA GATCGCTGAG CCGCTGGGTG CGGACGTCCA CATTGGCTTG
CATCCCGGCG AACAGCTCCG CTGCGCCGAT CTAGTTGATA AGCCGCACAT CCGCCAATTG
CTGGCCGACG TCCAAGCCCC CGGCTACCCC ACCAGCCTAA ACGAACATCC CAAGGCTGCA
TTGTCGGTGT CGATGGGCTT CGCCCCCGAC GACGAACTCG GCTCCAACGA CCTGCAGCTG
TGGCGTCAGA TCGAATTCCC CGGCACCAAC GGCCAGGTGT CTGCGCTGGG GCTGGCGACG
TTCTACAACG GGCTTGCCCA GGAGAAGCTG CTCAGCCGCG AGCACATGGA GCTGGTCCGG
GTCTCACAGG GCGGCTTCGA CACCGATCTG GTGCTCGGCC CGAGGGTCGC CGACCATGGC
TGGGGTCTGG GCTACATGCT CAACCAGCGC GGCGTCAATG GACCCAACCC ACGGATTTTC
GGGCATGGTG GCCTCGGCGG CTCGTTTGGG TTCGTCGACC TCGAGCACCG GATCGGCTAC
GCCTACGTGA TGAACCGCTT CGACGCCACC AAGGCCAACG CGGATCCGCG CAGCGTCGTC
CTGTCCAACG AGGTCTACGC CGCGCTCGGG GTAAACCGTT CCTAG
 
Protein sequence
MNQPDIKGSC ASEFTKVRDA FERNFVLRNE VGAAVAVWVD GDLVVNLWGG SADAGGTRPW 
QHDTLATVLS GTKALTATCV HQLVDRGELD LHAPVARYWP EFGQAGKQAI TLAMVMSHRS
GAIGPRGRLG WEQVADWDFV CEQLAAAEPW WQPGAAQGYH MTTFGFILGE VFRRVTGRTV
GQYLRTEIAE PLGADVHIGL HPGEQLRCAD LVDKPHIRQL LADVQAPGYP TSLNEHPKAA
LSVSMGFAPD DELGSNDLQL WRQIEFPGTN GQVSALGLAT FYNGLAQEKL LSREHMELVR
VSQGGFDTDL VLGPRVADHG WGLGYMLNQR GVNGPNPRIF GHGGLGGSFG FVDLEHRIGY
AYVMNRFDAT KANADPRSVV LSNEVYAALG VNRS