Gene TBFG_12484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12484 
Symbol 
ID5223161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2775483 
End bp2777054 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content63% 
IMG OID640607241 
Productintegral membrane transport protein 
Protein accessionYP_001288413 
Protein GI148823659 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones376 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones215 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCGG CACCCGACAC CGTGGAGGGC GATTCCCACA CTGCAATGAC ACCGCGCCAG 
CGGCTGACCG TGTTGGCAAC GGGGCTGGGC ATCTTCATGG TGTTCGTGGA CGTCAACATC
GTCAATGTCG CATTGCCCAG CATCCAAAAG GTGTTTCACA CGGGCGAACA AGGTCTGCAG
TGGGCGGTCG CCGGGTACAG CCTGGGCATG GCGGCCGTGC TGATGAGTTG CGCCCTGCTG
GGCGATCGCT ACGGTCGCAG GCGCAGTTTT GTGTTCGGGG TCACGCTCTT CGTCGTGAGC
TCTATTGTCT GTGTGCTACC GGTCAGCCTG GCAGTTTTCA CGGTCGCACG AGTGATCCAA
GGTTTAGGAG CGGCGTTCAT CTCAGTGCTC TCGCTGGCCT TGCTAAGCCA CTCCTTTCCC
AATCCCCGAA TGAAAGCACG GGCGATATCC AACTGGATGG CCATAGGCAT GGTCGGTGCG
GCATCTGCCC CCGCGCTGGG CGGGCTCATG GTCGACGGCC TCGGTTGGCG CAGCGTGTTC
CTGGTGAACG TTCCGCTCGG TGCCATCGTG TGGCTGCTGA CGCTAGTCGG TGTCGACGAG
TCACAGGATC CCGAGCCCAC TCAACTCGAC TGGGTGGGAC AGCTGACGCT TATCCCGGCC
GTCGCCCTGA TCGCATACAC CATCATCGAG GCTCCCCGGT TCGACCGGCA GTCCGCCGGG
TTCGTGGCGG CGTTGCTGTT AGCGGCTGGG GTACTGCTGT GGCTGTTTGT TCGACACGAA
CACCGCGCCG CTTTCCCGTT GGTCGATCTC AAACTGTTCG CCGAGCCGTT GTACCGATCG
GTGCTGATCG TCTACTTCGT GGTGATGTCC TGCTTTTTCG GGACTCTGAT GGTGATCACC
CAGCACTTCC AAAATGTGCG CGACCTATCG CCGCTGCACG CGGGTTTGAT GATGTTGCCG
GTCCCCGCGG GATTCGGGGT GGCGAGTCTG CTGGCGGGTA GGGCGGTCAA CAAATGGGGT
CCTCAGCTCC CGGTGCTGAC GTGCCTGGCG GCCATGTTCA TCGGGTTGGC GATTTTCGCG
ATCTCGATGG ACCACGCGCA TCCAGTGGCC CTTGTTGGCC TGACGATCTT TGGCGCGGGA
GCCGGCGGCT GCGCCACACC GCTGTTGCAT CTTGGAATGA CCAAGGTCGA TGATGGCCGT
GCCGGCATGG CCGCCGGGAT GCTCAATCTG CAGCGGTCGC TGGGCGGCAT TTTCGGCGTC
GCCTTCCTGG GCACCATTGT CGCGGCCTGG TTGGGTGCCG CGCTGCCGAA CACCATGGCC
GACGAAATTC CCGATCCCAT CGCTCGCGCG ATCGTTGTCG ACGTCATCGT GGACAGCGCG
AATCCGCATG CCCACGCGGC ATTTATCGGG CCAGGACACC GGATAACTGC GGCGCAGGAG
GATGAGATCG TACTGGCCGC CGACGCGGTC TTCGTGAGCG GAATCAAGCT CGCGTTGGGC
GGCGCCGCCG TATTGCTGAC CGGCGCGTTC GTCCTTGGTT GGACGCGCTT CCCCCGGACC
CCCGCCAGCT AA
 
Protein sequence
MTAAPDTVEG DSHTAMTPRQ RLTVLATGLG IFMVFVDVNI VNVALPSIQK VFHTGEQGLQ 
WAVAGYSLGM AAVLMSCALL GDRYGRRRSF VFGVTLFVVS SIVCVLPVSL AVFTVARVIQ
GLGAAFISVL SLALLSHSFP NPRMKARAIS NWMAIGMVGA ASAPALGGLM VDGLGWRSVF
LVNVPLGAIV WLLTLVGVDE SQDPEPTQLD WVGQLTLIPA VALIAYTIIE APRFDRQSAG
FVAALLLAAG VLLWLFVRHE HRAAFPLVDL KLFAEPLYRS VLIVYFVVMS CFFGTLMVIT
QHFQNVRDLS PLHAGLMMLP VPAGFGVASL LAGRAVNKWG PQLPVLTCLA AMFIGLAIFA
ISMDHAHPVA LVGLTIFGAG AGGCATPLLH LGMTKVDDGR AGMAAGMLNL QRSLGGIFGV
AFLGTIVAAW LGAALPNTMA DEIPDPIARA IVVDVIVDSA NPHAHAAFIG PGHRITAAQE
DEIVLAADAV FVSGIKLALG GAAVLLTGAF VLGWTRFPRT PAS