| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12471 |
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| Symbol | |
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| ID | 5223148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 2756797 |
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| End bp | 2759658 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640607228 |
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| Product | ribonuclease E rne |
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| Protein accession | YP_001288400 |
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| Protein GI | 148823646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 136 |
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| Plasmid unclonability p-value | 0.00011708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 205 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAGACG GTGCCCCACC TTCAGATCCA CCAGAACCGA GCCAGCATGA GGAACTGCCG
GACCGCCTAA GAGTCCATTC GCTGGCACGA ACGCTGGGAA CCACCAGCAG GCGGGTGCTG
GATGCGCTCA CCGCGCTCGA CGGACGGGTC CGCAGCGCAC ATTCCACGGT GGATCGCGTC
GATGCGGTCC GGGTGCGCGA TCTGCTGGCC ACTCATCTCG AGACTGCCGG CGTGCTGGCG
GCCTCGGTCC ATGCGCCCGA AGCGTCCGAG GAACCCGAGT CCCGGCTGAT GCTAGAGACC
CAGGAGACTC GGAATGCCGA CGTGGAGCGG CCGCACTATA TGCCGCTGTT CGTCGCGCCC
CAGCCGATTC CCGAGCCGTT AGCGGACGAC GAGGACGTCG ACGATGGCCC CGACTACGTC
GCCGACGATT CCGACGCTGA CGACGAAGGG CAGCTAGACC GGCCGGCGAA CCGGCGGCGA
CGTCGCGGCC GTCGGGGTCG CGGTCGCGGA CGCGGGGAGC AGGGTGGATC CGACGGTGAT
CCGGTTGACC AGCAATCCGA GCCCCGGGCC CAACAATTTA CCAGCGCGGA CGCCGCCGAA
ACCGACGACG GCGACGATCG AGATTCCGAA GATACCGAAG CCGGTGACAA CGGCGAGGAC
GAAAACGGTT CGCTGGAGGC CGGCAATCGT CGCCGGCGCC GCCGGCGACG GCGTAAGTCG
GCTTCTGGTG ACGACAACGA CGCTGCGTTA GAGGGCCCGT TGCCTGACGA TCCGCCCAAC
ACTGTCGTAC ACGAACGCGT GCCCCGCGCG GGTGACAAGG CCGGCAACTC GCAGGATGGC
GGCTCTGGCT CCACTGAGAT CAAGGGCATC GACGGCTCGA CCCGCCTGGA AGCCAAGCGG
CAACGCCGCC GCGACGGGCG CGACGCCGGC CGGCGCCGCC CACCGGTGTT GAGTGAGGCC
GAGTTTCTGG CTCGCCGTGA GGCGGTCGAG CGGGTGATGG TGGTGCGCGA CCGGGTCCGC
ACCGAGCCAC CGCTGCCGGG CACGCGGTAC ACCCAGATTG CGGTGCTCGA AGACGGTATC
GTCGTGGAGC ATTTCGTGAC GTCTGCGGCC TCGGCTTCCC TGGTGGGCAA CATCTACCTG
GGAATTGTGC AGAACGTGCT GCCGTCGATG GAGGCGGCGT TCGTCGACAT CGGGCGCGGT
CGCAATGGAG TGCTCTACGC CGGTGAAGTC AATTGGGATG CAGCGGGGTT GGGCGGGGCC
GATCGCAAGA TCGAGCAGGC CCTCAAACCC GGCGACTATG TCGTGGTGCA GGTCAGCAAG
GACCCGGTAG GGCATAAGGG CGCGCGGCTG ACCACGCAGG TGTCGCTGGC CGGTCGATTT
CTGGTTTATG TGCCGGGCGC GTCGTCGACC GGGATCAGCC GCAAGCTGCC CGACACTGAA
CGTCAGCGGC TCAAGGAGAT CCTGCGCGAG GTGGTGCCGT CTGACGCTGG GGTCATCATC
CGTACCGCGT CTGAGGGCGT CAAAGAGGAC GACATTCGCG CAGACGTCGC TCGGCTACGG
GAACGCTGGG AGCAGATCGA GGCCAAGGCA CAAGAGACCA AGGAGAAGGC CGCGGGCGCT
GCGGTGGCGC TGTACGAAGA ACCGGACGTG CTGGTCAAGG TTATCCGTGA CCTGTTCAAC
GAGGACTTCG TCGGCCTCAT CGTTTCCGGC GACGAGGCTT GGAACACGAT CAATGAATAC
GTGAATTCTG TTGCTCCCGA ATTGGTTTCG AAGTTGACCA AGTACGAGTC CGCTGACGGG
CCGGATGGCC AGTCCGCGCC GGACGTCTTC ACGGTGCACC GCATTGACGA GCAGCTGGCC
AAAGCGATGG ACCGCAAGGT GTGGTTGCCG TCGGGCGGGA CGCTGGTGAT CGACCGGACC
GAAGCCATGA CGGTCATTGA CGTCAACACC GGTAAATTCA CCGGAGCCGG GGGCAACCTC
GAGCAGACGG TCACCAAGAA CAATCTGGAA GCGGCCGAGG AGATCGTGCG CCAGCTGCGG
CTGCGCGATA TCGGCGGCAT CGTGGTCATC GACTTCATCG ACATGGTGCT GGAGTCCAAC
CGCGACTTGG TGTTGCGCCG GTTGACCGAG TCGCTGGCCC GCGATCGCAC CCGCCACCAG
GTGTCCGAGG TGACGTCGCT GGGGCTGGTG CAGTTGACTC GCAAGCGGTT GGGAACCGGA
CTGATCGAAG CGTTCTCCAC ATCGTGTCCG AACTGCAGTG GCCGCGGGAT CCTGCTGCAC
GCCGACCCGG TCGATTCGGC CGCGGCGACT GGGCGAAAGT CTGAGCCCGG TGCTCGGCGG
GGCAAGCGAT CGAAAAAGAG CCGGTCCGAA GAGTCCAGTG ATAGGAGCAT GGTCGCCAAG
GTCCCCGTGC ACGCTCCCGG TGAGCATCCC ATGTTCAAGG CGATGGCAGC GGGCTTGTCC
TCGCTGGCTG GTCGCGGTGA CGAGGAATCC GGGGAGCCCG CTGCCGAACT CGCCGAGCAG
GCCGGCGATC AACCGCCCAC TGACCTCGAC GACACCGCCC AAGCGGACTT CGAGGACACC
GAGGACACCG ACGAAGACGA GGACGAGCTC GACGCCGACG AGGACCTCGA GGACCTCGAC
GACGAGGACC TCGACGAGGA TCTCGACGTT GAAGACTCCG ATTCCGACGA CGAAGACTCC
GACGAAGACG CCGCCGATGC CGACGTCGAC GAGGAGGATG CAGCCGGCTT GGACGGTTCC
CCGGGCGAAG TCGACGTCCC CGGTGTCACG GAGCTGGCCC CTACCCGTCC ACGTCGGCGC
GTTGCGGGCC GGCCGGCCGG CCCACCAATC CGCCTAGACT GA
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| Protein sequence | MIDGAPPSDP PEPSQHEELP DRLRVHSLAR TLGTTSRRVL DALTALDGRV RSAHSTVDRV
DAVRVRDLLA THLETAGVLA ASVHAPEASE EPESRLMLET QETRNADVER PHYMPLFVAP
QPIPEPLADD EDVDDGPDYV ADDSDADDEG QLDRPANRRR RRGRRGRGRG RGEQGGSDGD
PVDQQSEPRA QQFTSADAAE TDDGDDRDSE DTEAGDNGED ENGSLEAGNR RRRRRRRRKS
ASGDDNDAAL EGPLPDDPPN TVVHERVPRA GDKAGNSQDG GSGSTEIKGI DGSTRLEAKR
QRRRDGRDAG RRRPPVLSEA EFLARREAVE RVMVVRDRVR TEPPLPGTRY TQIAVLEDGI
VVEHFVTSAA SASLVGNIYL GIVQNVLPSM EAAFVDIGRG RNGVLYAGEV NWDAAGLGGA
DRKIEQALKP GDYVVVQVSK DPVGHKGARL TTQVSLAGRF LVYVPGASST GISRKLPDTE
RQRLKEILRE VVPSDAGVII RTASEGVKED DIRADVARLR ERWEQIEAKA QETKEKAAGA
AVALYEEPDV LVKVIRDLFN EDFVGLIVSG DEAWNTINEY VNSVAPELVS KLTKYESADG
PDGQSAPDVF TVHRIDEQLA KAMDRKVWLP SGGTLVIDRT EAMTVIDVNT GKFTGAGGNL
EQTVTKNNLE AAEEIVRQLR LRDIGGIVVI DFIDMVLESN RDLVLRRLTE SLARDRTRHQ
VSEVTSLGLV QLTRKRLGTG LIEAFSTSCP NCSGRGILLH ADPVDSAAAT GRKSEPGARR
GKRSKKSRSE ESSDRSMVAK VPVHAPGEHP MFKAMAAGLS SLAGRGDEES GEPAAELAEQ
AGDQPPTDLD DTAQADFEDT EDTDEDEDEL DADEDLEDLD DEDLDEDLDV EDSDSDDEDS
DEDAADADVD EEDAAGLDGS PGEVDVPGVT ELAPTRPRRR VAGRPAGPPI RLD
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