| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12430 |
|---|
| Symbol | |
|---|
| ID | 5223107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 2713182 |
|---|
| End bp | 2715110 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640607187 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001288359 |
|---|
| Protein GI | 148823605 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 304 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 212 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTAT CGTCCAGTTC GCCACTGCGC AACCCGTTTC CGCCGATCGC CGACTACGCG
TTCTTGTCCG ATTGGGAAAC GACGTGCCTG ATTTCGCCGG CGGGTTCGGT GGAGTGGCTG
TGTGTGCCAC GGCCGGACTC CCCCAGTGTG TTCGGCGCGA TCCTGGACCG CAGCGCCGGC
CATTTTCGTC TGGGCCCCTA CGGTGTTTCG GTGCCTTCGG CGCGACGCTA CCTTCCGGGC
AGCCTGATCA TGGAGACCAC CTGGCAGACC CATACCGGCT GGCTGATCGT GCGAGACGCG
CTGGTGATGG GTAAATGGCA CGATATCGAA CGGCGATCGC GGACCCACCG CCGCACCCCG
ATGGACTGGG ACGCCGAGCA CATCCTGTTG CGCACGGTGC GCTGCGTCAG CGGCACCGTT
GAACTGATGA TGAGCTGCGA GCCGGCGTTC GACTATCACC GCTTGGGCGC CACCTGGGAA
TACTCGGCCG AGGCTTACGG CGAGGCCATA GCCCGCGCCA ACACGGAGCC CGACGCGCAC
CCGACGCTGC GGCTGACCAC CAACCTGCGG ATCGGGCTGG AGGGCCGGGA AGCACGCGCA
CGCACCCGGA TGAAGGAGGG TGACGACGTG TTCGTCGCGC TGAGCTGGAC CAAACACCCG
CCGCCGCAGA CCTACGACGA GGCCGCCGAC AAGATGTGGC AAACCACCGA GTGCTGGCGG
CAGTGGATCA ACATCGGCAA CTTCCCCGAC CACCCATGGC GGGCGTACCT GCAGCGCAGC
GCGCTAACCC TGAAGGGGTT GACCTACTCC CCCACCGGGG CGCTGCTCGC GGCGAGCACC
ACGTCGCTGC CGGAAACCCC GCGAGGCGAA CGCAACTGGG ACTACCGCTA TGCCTGGATT
CGCGACTCGA CCTTCGCGCT GTGGGGGCTC TACACCCTGG GATTGGACCG GGAAGCCGAC
GACTTCTTTG CGTTCATCGC CGACGTGTCC GGCGCCAACA ACAACGAACG CCATCCGCTG
CAGGTGATGT ACGGGGTGGG CGGTGAACGC AGCCTGGTCG AAGCGGAGCT GCACCATTTG
TCCGGCTACG ATCATGCCCG CCCGGTGCGC ATCGGCAACG GCGCCTACAA CCAGCGCCAA
CACGACATCT GGGGTTCGAT CCTGGACTCG TTTTACCTGC ACGCAAAGTC CCGCGAGCAA
GTCCCGGAGA ACCTATGGCC GGTGCTGAAG CGGCAGGTGG AAGAGGCCAT CAAGCATTGG
CGTGAGCCCG ACCGGGGAAT CTGGGAGGTG CGCGGCGAGC CGCAACACTT CACGTCGTCG
AAGGTGATGT GCTGGGTCGC CTTGGACCGG GGGGCCAAAC TGGCCGAGCG TCAGGGCGAG
AAAAGCTACG CCCAGCAGTG GCGGGCCATC GCCGACGAGA TCAAGGCCGA CATTCTGGAA
CACGGGGTGG ACTCGCGCGG CGTGTTCACC CAGCGCTACG GCGATGAGGC GTTGGACGCC
TCACTGCTGC TGGTGGTGCT GACCCGATTC CTGCCGCCGG ACGACCCGCG GGTGCGCAAC
ACCGTGCTGG CCATCGCCGA CGAGCTGACC GAGGACGGCC TGGTGTTGAG GTACCGGGTG
CATGAGACCG ACGACGGGCT TTCCGGCGAG GAAGGCACGT TCACCATCTG CTCGTTTTGG
CTGGTATCGG CGCTGGTCGA GATCGGTGAG GTGGGCCGCG CCAAGCGGCT GTGCGAGCGG
CTGTTGTCCT TCGCCAGCCC GCTGCTGCTC TACGCGGAGG AGATTGAGCC GCGGAGCGGG
CGTCACCTGG GCAACTTCCC GCAGGCGTTC ACCCACCTGG CACTGATCAA CGCCGTGGTC
CACGTGATTC GCGCCGAGGA GGAAGCCGAC AGCTCGGGGA TGTTTCAGCC CGCCAACGCC
CCCATGTAG
|
|---|
| Protein sequence | MALSSSSPLR NPFPPIADYA FLSDWETTCL ISPAGSVEWL CVPRPDSPSV FGAILDRSAG
HFRLGPYGVS VPSARRYLPG SLIMETTWQT HTGWLIVRDA LVMGKWHDIE RRSRTHRRTP
MDWDAEHILL RTVRCVSGTV ELMMSCEPAF DYHRLGATWE YSAEAYGEAI ARANTEPDAH
PTLRLTTNLR IGLEGREARA RTRMKEGDDV FVALSWTKHP PPQTYDEAAD KMWQTTECWR
QWINIGNFPD HPWRAYLQRS ALTLKGLTYS PTGALLAAST TSLPETPRGE RNWDYRYAWI
RDSTFALWGL YTLGLDREAD DFFAFIADVS GANNNERHPL QVMYGVGGER SLVEAELHHL
SGYDHARPVR IGNGAYNQRQ HDIWGSILDS FYLHAKSREQ VPENLWPVLK RQVEEAIKHW
REPDRGIWEV RGEPQHFTSS KVMCWVALDR GAKLAERQGE KSYAQQWRAI ADEIKADILE
HGVDSRGVFT QRYGDEALDA SLLLVVLTRF LPPDDPRVRN TVLAIADELT EDGLVLRYRV
HETDDGLSGE EGTFTICSFW LVSALVEIGE VGRAKRLCER LLSFASPLLL YAEEIEPRSG
RHLGNFPQAF THLALINAVV HVIRAEEEAD SSGMFQPANA PM
|
|---|
| |