| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12397 |
|---|
| Symbol | |
|---|
| ID | 5223075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2665332 |
|---|
| End bp | 2666120 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640607155 |
|---|
| Product | 16S ribosomal RNA methyltransferase RsmE |
|---|
| Protein accession | YP_001288328 |
|---|
| Protein GI | 148823574 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 280 |
|---|
| Plasmid unclonability p-value | 0.00000494529 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 213 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCGA TGCTGTTTTA CGTCGACACA CTGCCCGACA CCGGTGCGGT GGCGGTCGTA
GACGGCGACG AAGGATTTCA CGCCGCCACC GTGCGGCGGA TCCGTCCCGG CGAGCAGTTG
GTGCTTGGTG ACGGTGTCGG TCGCCTGGCC CGCTGTGTGG TGGAGCAGGC CGGACGTGGC
GGGCTGCGGG CCCGGGTGCT TAGGCGCTGG AGCGTCCCGC CCGTGCGGCC ACCGGTGACC
GTGGTGCAGG CGCTGCCCAA ATCCGAACGC TCCGAATTGG CAATCGAGCT GGCCACCGAA
GCCGGAGCCG ACGCGTTCCT GGCATGGCAG GCGGCGCGCT GCGTGGCGAA CTGGGACGGG
GCGCGTGTCG ACAAGGGTTT GCGTCGGTGG CGAGCGGTGG TCCGCTCGGC GGCCCGGCAA
TCTCGTCGGG CGCGCATCCC GCCGGTCGAC GGCGTGTTGT CGACGCCAAT GCTTGTACAG
CGTGTCCGAG AAGAGGTGGC CGCCGGCGCG GCGGTGCTGG TCCTGCACGA GGAGGCGACC
GAGCGGATTG TGGATATCGC TGCGGCGCAA GCTGGTTCGT TGATGCTCGT GGTTGGACCC
GAGGGTGGGA TCGCACCGGA CGAGCTTGCC GCGCTGACCG ATGCCGGCGC CGTCGCGGTC
CGGCTGGGCC CGACGGTGCT GCGGACATCG ACCGCGGCCG CGGTGGCATT GGGTGCTGTC
GGTGTGCTCA CATCTCGTTG GGATGCATCA GCGAGCGACT GTGAATACTG CGACGTGACA
CGCCGGTAG
|
|---|
| Protein sequence | MVAMLFYVDT LPDTGAVAVV DGDEGFHAAT VRRIRPGEQL VLGDGVGRLA RCVVEQAGRG
GLRARVLRRW SVPPVRPPVT VVQALPKSER SELAIELATE AGADAFLAWQ AARCVANWDG
ARVDKGLRRW RAVVRSAARQ SRRARIPPVD GVLSTPMLVQ RVREEVAAGA AVLVLHEEAT
ERIVDIAAAQ AGSLMLVVGP EGGIAPDELA ALTDAGAVAV RLGPTVLRTS TAAAVALGAV
GVLTSRWDAS ASDCEYCDVT RR
|
|---|
| |