Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12388 |
Symbol | recO |
ID | 5223066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2656756 |
End bp | 2657553 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640607146 |
Product | DNA repair protein RecO |
Protein accession | YP_001288319 |
Protein GI | 148823565 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 328 |
Plasmid unclonability p-value | 0.0535706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 229 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGT ATCGGGACCG GGCTGTTGTG CTGCGCCAGC ACAAGCTCGG CGAAGCCGAC CGGATCGTCA CCCTGCTGAC CCGCGATCAC GGGTTGGTCC GCGCGGTGGC CAAAGGTGTT CGACGCACCC GCAGCAAATT CGGCGCGCGC CTGGAGCCGT TCGCGCATAT CGAGGTGCAA CTGCACCCTG GCCGCAACCT CGACATCGTC ACCCAGGTTG TCTCTGTCGA CGCGTTCGCC ACCGACATCG TCGCCGATTA CGGCCGCTAC ACCTGCGGAT GCGCGATACT GGAAACCGCC GAACGCCTGG CCGGTGAGGA GCGGGCGCCC GCTCCGGCTC TGCACCGGCT CACGGTGGGC GCGCTGCGGG CGGTGGCCGA TGGACAGCGG CCTCGGGACC TGTTGTTGGA CGCCTATCTG CTGCGCGCCA TGGGCATCGC CGGCTGGGCA CCAGCGTTGA CCGAGTGCGC CCGCTGCGCC ACGCCTGGTC CGCATCGGGC GTTTCACATC GCGACCGGGG GCAGTGTCTG CGCACACTGC CGTCCGGCCG GCTCGACCAC ACCGCCGCTG GGCGTCGTAG ACCTGATGTC CGCGCTGTAC GACGGCGATT GGGAGGCCGC CGAGGCGGCG CCGCAATCGG CCCGCAGCCA TGTCAGCGGG TTGGTGGCCG CACACCTGCA ATGGCATCTG GAACGGCAGC TGAAAACGTT GCCGCTGGTG GAGCGGTTCT ACCAGGCCGA TCGATCGGTT GCCGAACGTC GCGCCGCGCT GATCGGGCAG GATATAGCCG GTGGCTAG
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Protein sequence | MRLYRDRAVV LRQHKLGEAD RIVTLLTRDH GLVRAVAKGV RRTRSKFGAR LEPFAHIEVQ LHPGRNLDIV TQVVSVDAFA TDIVADYGRY TCGCAILETA ERLAGEERAP APALHRLTVG ALRAVADGQR PRDLLLDAYL LRAMGIAGWA PALTECARCA TPGPHRAFHI ATGGSVCAHC RPAGSTTPPL GVVDLMSALY DGDWEAAEAA PQSARSHVSG LVAAHLQWHL ERQLKTLPLV ERFYQADRSV AERRAALIGQ DIAGG
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