Gene TBFG_12382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12382 
Symbol 
ID5223060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2650983 
End bp2652830 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content62% 
IMG OID640607140 
ProductPPE family protein 
Protein accessionYP_001288313 
Protein GI148823559 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones163 
Plasmid unclonability p-value0.00000000000105692 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones213 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAATT TTTCGGTGTT GCCGCCGGAG ATTAATTCGG GGCGGATGTT TTTTGGTGCG 
GGGTCGGGGC CGATGTTGGC GGCGGCGGCG GCCTGGGATG GGTTGGCGGC TGAGTTGGGG
TTGGCGGCGG AGTCGTTTGG GTTGGTGACC TCGGGTCTGG CGGGTGGGTC GGGTCAGGCG
TGGCAGGGTG CGGCGGCGGC GGCGATGGTG GTGGCGGCGG CGCCGTATGC GGGGTGGTTG
GCTGCTGCGG CGGCGCGGGC TGGGGGGGCT GCGGTTCAGG CTAAGGCGGT GGCCGGCGCG
TTTGAGGCGG CGCGGGCGGC CATGGTGGAT CCGGTGGTGG TGGCGGCTAA TCGCAGTGCG
TTTGTGCAGT TGGTGCTGTC GAATGTGTTT GGGCAGAATG CGCCGGCGAT TGCCGCTGCT
GAGGCCACCT ATGAGCAGAT GTGGGCTGCC GATGTGGCGG CGATGGTGGG TTATCACGGT
GGGGCATCGG CGGCGGCGGC GGCGTTGGCG CCATGGCAGC AGGCGGTGCC GGGCTTGTCG
GGCTTGCTAG GCGGTGCGGC TAACGCACCG GCGGCCGCTG CACAAGGCGC TGCACAAGGC
CTCGCCGAGC TGACCTTGAA TTTGGGTGTC GGCAACATCG GCAGCCTCAA CCTGGGCAGC
GGCAACATCG GCGGTACCAA CGTGGGCAGT GGCAATGTCG GCGGCACCAA CCTGGGCAGC
GGGAACTACG GCAGCCTGAA CTGGGGCAGC GGAAACACCG GTACCGGCAA TGCCGGCAGC
GGAAACACGG GTGACTACAA CCCTGGCAGC GGAAACTTCG GCAGCGGAAA CTTCGGCAGC
GGAAATATCG GCAGCCTCAA TGTGGGCAGC GGAAACTTCG GCACGCTCAA CCTCGCCAAC
GGAAATAACG GTGATGTCAA TTTCGGCGGC GGGAACACCG GCGACTTCAA CTTTGGCGGC
GGGAATAATG GCACCCTCAA CTTTGGGTTC GGAAACACCG GCAGCGGGAA TTTCGGTTTC
GGAAACACGG GCAACAACAA TATCGGTATC GGGCTCACCG GTGATGGTCA GATCGGCATC
GGCGGACTGA ACTCAGGCAC TGGAAACATC GGCTTCGGAA ACTCCGGCAA CAACAACATC
GGCTTCTTCA ACTCGGGTGA TGGAAACATC GGCTTCTTCA ACTCGGGTGA CGGCAACACG
GGTTTCGGGA ACGCCGGAAA TATCAACACC GGTTTCTGGA ACGCAGGCAA TTTAAACACG
GGCTTCGGGA GTGCCGGCAA CGGAAACGTC GGTATCTTCG ACGGCGGGAA CTCAAACTCG
GGCAGCTTCA ACGTGGGCTT TCAGAACACC GGCTTCGGAA ATTCGGGTGC TGGAAACACC
GGCTTCTTCA ATGCGGGTGA CTCGAACACC GGTTTCGCGA ACGCAGGTAA CGTCAACACC
GGTTTCTTTA ACGGTGGAGA TATCAACACC GGTGGTTTCA ATGGCGGCAA CGTCAACACC
GGTTTTGGCA GCGCGCTCAC CCAAGCAGGT GCCAACTCGG GCTTCGGGAA CCTCGGTACC
GGCAACTCGG GTTGGGGGAA CAGTGACCCC TCGGGCACCG GCAACTCCGG GTTCTTCAAC
ACAGGCAACG GTAATTCGGG CTTCTCCAAC GCCGGCCCAG CCATGCTTCC TGGCTTCAAC
TCCGGGTTTG CAAACATTGG CTCTTTCAAT GCAGGAATTG CAAACTCGGG TAACAACCTC
GCCGGTATCT CCAACTCGGG TGACGACAGT TCGGGTGCGG TAAATTCGGG TAGCCAGAAC
TCCGGTGCTT TCAATGCGGG TGTAGGACTT TCGGGATTCT TCAGGTAG
 
Protein sequence
MVNFSVLPPE INSGRMFFGA GSGPMLAAAA AWDGLAAELG LAAESFGLVT SGLAGGSGQA 
WQGAAAAAMV VAAAPYAGWL AAAAARAGGA AVQAKAVAGA FEAARAAMVD PVVVAANRSA
FVQLVLSNVF GQNAPAIAAA EATYEQMWAA DVAAMVGYHG GASAAAAALA PWQQAVPGLS
GLLGGAANAP AAAAQGAAQG LAELTLNLGV GNIGSLNLGS GNIGGTNVGS GNVGGTNLGS
GNYGSLNWGS GNTGTGNAGS GNTGDYNPGS GNFGSGNFGS GNIGSLNVGS GNFGTLNLAN
GNNGDVNFGG GNTGDFNFGG GNNGTLNFGF GNTGSGNFGF GNTGNNNIGI GLTGDGQIGI
GGLNSGTGNI GFGNSGNNNI GFFNSGDGNI GFFNSGDGNT GFGNAGNINT GFWNAGNLNT
GFGSAGNGNV GIFDGGNSNS GSFNVGFQNT GFGNSGAGNT GFFNAGDSNT GFANAGNVNT
GFFNGGDINT GGFNGGNVNT GFGSALTQAG ANSGFGNLGT GNSGWGNSDP SGTGNSGFFN
TGNGNSGFSN AGPAMLPGFN SGFANIGSFN AGIANSGNNL AGISNSGDDS SGAVNSGSQN
SGAFNAGVGL SGFFR