Gene TBFG_12379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12379 
Symbol 
ID5223057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2647019 
End bp2648860 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content61% 
IMG OID640607137 
ProductPPE family protein 
Protein accessionYP_001288310 
Protein GI148823556 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones162 
Plasmid unclonability p-value0.00000000000086115 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones214 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGC GGTTCAGGAT GTTTTTTGGT GCGGGGTCGG GGCCGATGTT GGCGGCGGCG 
GCGGCCTGGG ATGGGTTGGC GGCTGAGTTG GGGTTGGCGG CGGAGTCGTT TGGGTTGGTG
ACCTCGGGTC TGGCGGGTGG GTCGGGTCAG GCGTGGCAGG GTGCGGCGGC GGCGGCGATG
GTGGTGGCGG CGGCGCCGTA TGCGGGGTGG TTGGCTGCTG CGGCGGCGCG GGCTGGGGGG
GCTGCGGTTC AGGCTAAGGC GGTGGCCGGC GCGTTTGAGG CGGCGCGGGC GGCCATGGTG
GATCCGGTGG TGGTGGCGGC TAATCGCAGT GCGTTTGTGC AGTTGGTGCT GTCGAATGTG
TTTGGGCAGA ATGCGCCGGC GATTGCCGCT GCTGAGGCCA CCTATGAGCA GATGTGGGCT
GCCGATGTGG CGGCGATGGT GGGTTATCAC GGTGGGGCAT CGGCGGCGGC GGCGGCGTTG
GCGCCATGGC AGCAGGCGGT GCCGGGCTTG TTGGGCTTGC TAGATAGTGC ACAGTCCAGC
GCGCAAGCGG TGACCGCCCA AGCAGTCGGC TCCACCGTGC CTGGGCCTCT GCAGGGCATC
AACTTCGGCT TTGGCAACAT CGGGTCCCTC AATTTGGGCA GCGGAAATAC CGGTGACACG
AACGTCGGCA GCGGCAATAT CGGCAACACC AACCTAGGCG GCGGCAATAT CGGCAGCTTC
AACCTGGGCA GCGGTAACCA AGGTGACATC AACCTGGGCA TCGGTAACGT TGGCAACCTC
AACCTGGGCA GCGGAAACTT CGGTAGCCAA AACCTGGGTA GCGGCAACAT CGGCAGCACC
AACGTGGGCA GCGGCAACAT CGGCAGCACC AACGTGGGCA GCGGCAACAT CGGCGACACG
AACTTCGGTA ACGGAAACAA CGGCAACTTC AACTTTGGTA GCGGCAATAC CGGCAGTAAC
AACATCGGCT TCGGAAACAC CGGCAGCGGG AATTTCGGTT TCGGAAACAC GGGCAACAAC
AACATCGGTA TCGGGCTCAC CGGCGATGGT CAGATCGGCA TCGGCGGACT GAACTCGGGC
AGCGGAAACA TCGGTTTCGG GAACTCCGGC ACCGGAAACG TCGGTTTGTT CAACTCCGGC
ACCGGCAACG TAGGCTTCGG GAACTCCGGT ACTGCGAACA CTGGATTCGG GAACGCGGGC
AACGTCAACA CCGGATTTTG GAACGGCGGC AGCACAAACA CTGGCCTCGC TAACGCCGGC
GCCGGCAACA CAGGCTTTTT CGACGCTGGC AACTACAACT TCGGCAGTCT TAACGCCGGA
AACATAAACT CGAGTTTTGG GAATTCGGGT GACGGCAACA GTGGTTTCCT CAATGCTGGC
GACGTCAACT CCGGTGTGGG CAATGCGGGT GATGTCAACA CTGGCTTAGG GAACTCGGGC
AACATCAATA CTGGTGGGTT TAATCCGGGC ACGCTCAACA CGGGCTTCTT CAGCGCGATG
ACCCAAGCTG GTCCGAATTC GGGCTTCTTC AACGCCGGTA CCGGTAACTC TGGTTTCGGG
CACAACGACC CGGCTGGCAG TGGCAACTCG GGCATTCAGA ACTCGGGCTT CGGCAACTCG
GGCTATGTCA ATACCAGCAC CACAAGCATG TTCGGCGGTA ACTCAGGGGT GCTCAACACG
GGCTACGGCA ACTCAGGTTT CTATAACGCG GCCGTCAACA ACACCGGGAT TTTTGTGACC
GGCGTGATGA GTTCGGGATT TTTCAATTTT GGGACGGGCA ACTCGGGCCT GCTGGTCAGC
GGCAATGGGC TTTCGGGTTT CTTCAAGAAC TTGTTCGGAT AG
 
Protein sequence
MPGRFRMFFG AGSGPMLAAA AAWDGLAAEL GLAAESFGLV TSGLAGGSGQ AWQGAAAAAM 
VVAAAPYAGW LAAAAARAGG AAVQAKAVAG AFEAARAAMV DPVVVAANRS AFVQLVLSNV
FGQNAPAIAA AEATYEQMWA ADVAAMVGYH GGASAAAAAL APWQQAVPGL LGLLDSAQSS
AQAVTAQAVG STVPGPLQGI NFGFGNIGSL NLGSGNTGDT NVGSGNIGNT NLGGGNIGSF
NLGSGNQGDI NLGIGNVGNL NLGSGNFGSQ NLGSGNIGST NVGSGNIGST NVGSGNIGDT
NFGNGNNGNF NFGSGNTGSN NIGFGNTGSG NFGFGNTGNN NIGIGLTGDG QIGIGGLNSG
SGNIGFGNSG TGNVGLFNSG TGNVGFGNSG TANTGFGNAG NVNTGFWNGG STNTGLANAG
AGNTGFFDAG NYNFGSLNAG NINSSFGNSG DGNSGFLNAG DVNSGVGNAG DVNTGLGNSG
NINTGGFNPG TLNTGFFSAM TQAGPNSGFF NAGTGNSGFG HNDPAGSGNS GIQNSGFGNS
GYVNTSTTSM FGGNSGVLNT GYGNSGFYNA AVNNTGIFVT GVMSSGFFNF GTGNSGLLVS
GNGLSGFFKN LFG