| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12343 |
|---|
| Symbol | |
|---|
| ID | 5223020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2603511 |
|---|
| End bp | 2604926 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640607100 |
|---|
| Product | cationic amino acid transport integral membrane protein rocE |
|---|
| Protein accession | YP_001288274 |
|---|
| Protein GI | 148823520 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00909] amino acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 381 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 226 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC GAGAACTGAT GCTGCGGCGC CGCCCGGTGA GCGGCGCCCC GGTCGCATCC
GGGGCATCGG GGAACCTCAA GCGGAGTTTC GGCACCTTCC AGCTGACCAT GTTCGGGGTT
GGCGCGACGA TAGGTACCGG CATCTTTTTC GTGCTTGCCC AGGCAGTTCC AGAGGCCGGC
CCGGGCGTGA TTGTTTCGTT CATCATCGCC GGCATCGCCG CTGGGCTCGC GGCTATCTGC
TACGCGGAAC TGGCTTCCGC CGTGCCGATT TCCGGGTCGG CGTACTCCTA CGCGTACACG
ACGCTGGGCG AGGCGGTCGC GATGGTGGTG GCGGCCTGCC TACTGCTGGA ATACGGGGTA
GCCACCGCAG CGGTCGCGGT CGGCTGGAGT GGCTACGTGA ACAAGCTGCT GAGTAATCTG
TTCGGATTTC AGATGCCGCA CGTATTGTCG GCGGCGCCGT GGGACACCCA TCCCGGTTGG
GTGAACCTGC CCGCCGTCAT CCTGATCGGG CTATGCGCGC TGCTGTTGAT TCGAGGGGCC
AGCGAGTCGG CGAGGGTCAA CGCGATCATG GTGCTGATCA AGCTCGGCGT GCTGGGCATG
TTCATGATCA TCGCGTTCAG CGCGTACAGC GCCGACCACC TCAAGGATTT CGTCCCATTC
GGCGTCGCCG GCATCGGCTC CGCGGCGGGC ACGATCTTCT TCTCATACAT CGGCCTTGAC
GCGGTGTCGA CCGCCGGCGA CGAGGTGAAG GACCCGCAGA AGACCATGCC GCGTGCGCTG
ATCGCAGCGC TGGTGGTCGT CACCGGTGTC TACGTGCTGG TCGCACTGGC CGCGCTGGGC
ACCCAACCGT GGCAGGACTT CGCAGAGCAG GAAACCGCCG GGCTGGCCAT CATCTTGGAC
AACGTCACGC ATGGCGAATG GGCCAGCACG ATTCTGGCCG CCGGTGCGGT GGTCTCGATT
TTCACCGTCA CGCTGGTCAC CATGTACGGC CAGACCCGGA TCCTGTTCGC GATGGGGCGC
GACGGGCTGC TGCCGGCGCG GTTCGCGAAG GTGAATCCGC GCACCATGAC GCCGGTGCAC
AACACGGTGA TCGTCGCGAT CTTCGCATCG ACGCTGGCCG CCTTCATACC GCTGGATAGC
TTGGCGGACA TGGTGTCCAT CGGCACGCTC ACCGCGTTCA GCGTGGTGGC TGTGGGTGTG
ATCGTTCTAC GGGTGCGCGA GCCCGACTTA CCCCGAGGGT TCAAGGTACC CGGTTACCCT
GTGACGCCTG TTCTTTCGGT GCTGGCCTGC GGGTATATCC TGGCCAGCTT GCACTGGTAC
ACCTGGCTGG CGTTCAGCGG ATGGGTGGCG GTGGCAGTGA TCTTTTACCT GATGTGGGGT
CGGCACCACA GTGCGCTCAA CGAGGAAGTG CCGTGA
|
|---|
| Protein sequence | MSLRELMLRR RPVSGAPVAS GASGNLKRSF GTFQLTMFGV GATIGTGIFF VLAQAVPEAG
PGVIVSFIIA GIAAGLAAIC YAELASAVPI SGSAYSYAYT TLGEAVAMVV AACLLLEYGV
ATAAVAVGWS GYVNKLLSNL FGFQMPHVLS AAPWDTHPGW VNLPAVILIG LCALLLIRGA
SESARVNAIM VLIKLGVLGM FMIIAFSAYS ADHLKDFVPF GVAGIGSAAG TIFFSYIGLD
AVSTAGDEVK DPQKTMPRAL IAALVVVTGV YVLVALAALG TQPWQDFAEQ ETAGLAIILD
NVTHGEWAST ILAAGAVVSI FTVTLVTMYG QTRILFAMGR DGLLPARFAK VNPRTMTPVH
NTVIVAIFAS TLAAFIPLDS LADMVSIGTL TAFSVVAVGV IVLRVREPDL PRGFKVPGYP
VTPVLSVLAC GYILASLHWY TWLAFSGWVA VAVIFYLMWG RHHSALNEEV P
|
|---|
| |