Gene TBFG_12252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12252 
Symbol 
ID5222928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2505983 
End bp2507545 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content67% 
IMG OID640607008 
Productexported protease 
Protein accessionYP_001288185 
Protein GI148823431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones276 
Plasmid unclonability p-value0.212366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones214 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA TGTGGCGCCG CAGACCGTTG AGCTCGGCGC TGCTGTCCTT CGGGTTGCTG 
CTCGGCGGAC TGCCCCTAGC AGCGCCCCCG TTGGCCGGCG CGACTGAAGA ACCCGGCGCC
GGCCAAACCC CGGGTGCGCC GGTCGTGGCG CCGCAACAGA GTTGGAACAG CTGCCGCGAG
TTCATCGCCG ACACCAGCGA AATTCGCACT GCACGCTGCG CGACGGTGTC CGTCCCCGTC
GACTACGACC AACCCGGTGG GACACAAGCG AAGTTGGCGG TGATCCGCGT CCCCGCGACG
GGACAGCGAT TCGGAGCACT GCTGGTCAAT CCTGGGGGAC CCGGGGCGTC GGCGGTCGAC
ATGGTCGCCG CTATGGCACC CGCGATCGCC GACACCGACA TTCTCCGCCA CTTCGACCTG
GTGGGCTTCG ACCCGAGAGG GGTCGGCCAC TCGACCCCTG CGTTGCGGTG TCGCACCGAC
GCCGAGTTCG ACGCGTACCG GCGCGATCCG ATGGCCGACT ACAGTCCGGC CGGTGTCACC
CACGTCGAAC AGGTCTACCG GCAGTTGGCC CAGGACTGTG TTGACCGGAT GGGCTTCAGC
TTCTTGGCCA ATATCGGTAC CGCGTCCGTC GCACGGGACA TGGACATGGT TCGCCAAGCG
TTAGGTGACG ATCAGATCAA CTACCTCGGA TACAGCTACG GCACCGAGTT GGGCACCGCT
TACCTGGAAC GGTTCGGTAC TCATGTGCGG GCGATGGTCC TCGACGGCGC TATCGATCCA
GCCGTTAGCC CAATCGAGGA AAGCATCAGC CAAATGGCGG GATTTCAGAC CGCTTTCAAT
GACTACGCCG CCGACTGCGC CCGCTCGCCG GCCTGCCCTC TGGGCACCGA CTCGGCCCAG
TGGGTCAACC GCTACCACGC CCTGGTTGAC CCGCTGGTGC AGAAGCCGGG TAAGACGTCG
GATCCACGTG GCCTGAGCTA CGCCGACGCG ACGACGGGCA CCATCAACGC GCTGTACAGC
CCTCAGCGCT GGAAGTACCT GACCAGTGGT CTGCTGGGGC TGCAGCGCGG CAGCGACGCC
GGCGACTTGC TGGTGCTTGC CGACGACTAT GACGGCCGGG ATGCAGACGG GCACTACAGC
AACGACCAGG ACGCGTTCAA CGCGGTCCGG TGCGTCGATG CGCCCACACC GGCCGATCCA
GCGGCCTGGG TGGCCGCCGA CCAACGGATC CGTCAGGTCG CCCCGTTCCT TAGCTACGGG
CAGTTCACCG GATCCGCCCC CCGCGATCTG TGCGCGCTGT GGCCGGTGCC GGCAACGTCG
ACGCCGCACC CCGCGGCGCC GGCCGGGGCT GGCAAGGTCG TCGTGGTGTC CACCACCCAC
GACCCGGCCA CTCCGTATCA GTCCGGGGTA GACCTGGCCC GCCAGCTGGG CGCACCGCTG
ATCACCTTCG ACGGCACCCA ACACACTGCG GTGTTCGATG GCAACCAGTG TGTGGACTCT
GCGGTGATGC ACTATTTTCT CGACGGGACC TTGCCGCCGA CGAGTCTGCG GTGCGCGCCC
TGA
 
Protein sequence
MAAMWRRRPL SSALLSFGLL LGGLPLAAPP LAGATEEPGA GQTPGAPVVA PQQSWNSCRE 
FIADTSEIRT ARCATVSVPV DYDQPGGTQA KLAVIRVPAT GQRFGALLVN PGGPGASAVD
MVAAMAPAIA DTDILRHFDL VGFDPRGVGH STPALRCRTD AEFDAYRRDP MADYSPAGVT
HVEQVYRQLA QDCVDRMGFS FLANIGTASV ARDMDMVRQA LGDDQINYLG YSYGTELGTA
YLERFGTHVR AMVLDGAIDP AVSPIEESIS QMAGFQTAFN DYAADCARSP ACPLGTDSAQ
WVNRYHALVD PLVQKPGKTS DPRGLSYADA TTGTINALYS PQRWKYLTSG LLGLQRGSDA
GDLLVLADDY DGRDADGHYS NDQDAFNAVR CVDAPTPADP AAWVAADQRI RQVAPFLSYG
QFTGSAPRDL CALWPVPATS TPHPAAPAGA GKVVVVSTTH DPATPYQSGV DLARQLGAPL
ITFDGTQHTA VFDGNQCVDS AVMHYFLDGT LPPTSLRCAP