| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12238 |
|---|
| Symbol | |
|---|
| ID | 5222914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2487010 |
|---|
| End bp | 2488116 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640606994 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_001288171 |
|---|
| Protein GI | 148823417 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 292 |
|---|
| Plasmid unclonability p-value | 0.0127743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 201 |
|---|
| Fosmid unclonability p-value | 0.533205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCG GCTCCCTTCA ATTCACGGTG TTACGTGCGG TCAATCCGGC CACCGACGCG
CAGCGTGAAT CGATGCTGCG GGAGCCGGGT TTCGGCAAAT ACCACACCGA CCATATGGTG
TCGATCGACT ATGCCGAGGG CCGTGGTTGG CACAACGCGC GGGTAATCCC TTATGGCCCG
ATCGAGCTGG ATCCCTCGGC GATCGTGCTG CACTATGCGC AGGAGGTGTT CGAAGGGCTC
AAAGCCTACC GCTGGGCCGA CGGGTCCATC GTGTCGTTTC GCGCCGACGC CAACGCCGCC
AGGTTGCGTT CGTCGGCGCG GCGGTTGGCG ATTCCCGAAC TGCCCGACGC GGTGTTCATC
GAATCCCTGC GCCAGCTAAT CGCTGTCGAC AAAGCTTGGG TGCCCGGTGC CGGCGGTGAG
GAGGCGCTGT ATCTGCGGCC GTTCATCTTC GCCACCGAGC CGGGACTGGG CGTGCGGCCT
GCCACCCAAT ACCGTTACCT GTTGATCGCC TCGCCGGCCG GTGCGTACTT CAAGGGCGGC
ATCGCCCCTG TCAGCGTCTG GGTTTCGACG GAGTATGTAC GGGCCTGTCC GGGCGGCACC
GGTGCGGCCA AGTTCGGCGG CAACTACGCC GCCTCGTTGC TGGCGCAGGC CGAAGCCGCC
GAGAACGGAT GCGACCAGGT GGTGTGGCTG GACGCTGTGG AACGCCGCTA TATCGAAGAG
ATGGGTGGCA TGAACATCTT CTTCGTGCTC GGCAGCGGCG GATCGGCGCG GCTGGTCACC
CCGGAGCTGT CCGGTTCCCT GCTGCCCGGG ATCACACGGG ATTCGTTGTT GCAGTTGGCT
ATTGATGCCG GATTCGCGGT CGAGGAACGC AGGATTGATA TCGACGAGTG GCAGAAGAAA
GCCGCCGCCG GCGAGATCAC CGAGGTGTTT GCGTGCGGCA CCGCCGCTGT CATCACCCCG
GTCGCGCGGG TGCGGCACGG TGCCAGCGAG TTCAGAATCG CCGACGGTCA GCCGGGTGAG
GTGACCATGG CACTACGCGA TACGCTGACC GGCATCCAGC GGGGCACCTT CGCGGACACC
CACGGCTGGA TGGCGCGGCT GGGGTAG
|
|---|
| Protein sequence | MTSGSLQFTV LRAVNPATDA QRESMLREPG FGKYHTDHMV SIDYAEGRGW HNARVIPYGP
IELDPSAIVL HYAQEVFEGL KAYRWADGSI VSFRADANAA RLRSSARRLA IPELPDAVFI
ESLRQLIAVD KAWVPGAGGE EALYLRPFIF ATEPGLGVRP ATQYRYLLIA SPAGAYFKGG
IAPVSVWVST EYVRACPGGT GAAKFGGNYA ASLLAQAEAA ENGCDQVVWL DAVERRYIEE
MGGMNIFFVL GSGGSARLVT PELSGSLLPG ITRDSLLQLA IDAGFAVEER RIDIDEWQKK
AAAGEITEVF ACGTAAVITP VARVRHGASE FRIADGQPGE VTMALRDTLT GIQRGTFADT
HGWMARLG
|
|---|
| |