Gene TBFG_12228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12228 
Symbol 
ID5222904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2475806 
End bp2476897 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content60% 
IMG OID640606984 
Producttransmembrane cytochrome C oxidase subunit II ctaC 
Protein accessionYP_001288161 
Protein GI148823407 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones320 
Plasmid unclonability p-value0.272758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones214 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCTC GCGGGCCAGG TCGTTTGCAA CGCTTGTCGC AGTGCAGGCC TCAGCGCGGC 
TCCGGAGGGC CTGCCCGTGG TCTTCGACAG CTGGCGCTCG CAGCAATGCT GGGGGCATTG
GCCGTCACCG TCAGTGGATG CAGCTGGTCG GAAGCCCTGG GCATCGGTTG GCCGGAGGGC
ATTACCCCGG AGGCACACCT CAATCGAGAA CTGTGGATCG GGGCGGTGAT CGCCTCCCTG
GCGGTTGGGG TAATCGTGTG GGGTCTCATC TTCTGGTCCG CGGTATTTCA CCGGAAGAAG
AACACCGACA CTGAGTTGCC CCGCCAGTTC GGCTACAACA TGCCGCTAGA GCTGGTTCTC
ACCGTCATAC CGTTCCTCAT CATCTCGGTG CTGTTTTATT TCACCGTCGT GGTGCAGGAG
AAGATGCTGC AGATAGCCAA GGATCCCGAG GTCGTGATTG ATATCACGTC TTTCCAGTGG
AATTGGAAGT TTGGCTATCA AAGGGTGAAC TTCAAAGACG GCACACTGAC CTATGATGGT
GCCGATCCGG AGCGCAAGCG CGCCATGGTT TCCAAGCCAG AGGGCAAGGA CAAGTACGGC
GAAGAGCTGG TCGGGCCGGT GCGCGGGCTC AACACCGAGG ACCGGACCTA CCTGAATTTC
GACAAGGTCG AGACGTTGGG CACCAGCACC GAAATTCCGG TGCTGGTGCT GCCGTCCGGC
AAGCGTATCG AATTCCAAAT GGCCTCAGCC GATGTGATAC ACGCATTCTG GGTGCCGGAG
TTCTTGTTCA AGCGTGACGT GATGCCTAAC CCGGTGGCAA ACAACTCGGT CAACGTCTTC
CAGATCGAAG AAATCACCAA GACCGGAGCA TTCGTGGGCC ACTGCGCCGA GATGTGTGGC
ACGTATCACT CGATGATGAA CTTCGAGGTC CGCGTCGTGA CCCCCAACGA TTTCAAGGCC
TACCTGCAGC AACGCATCGA CGGGAAGACA AACGCCGAGG CCCTGCGGGC GATCAACCAG
CCGCCCCTTG CGGTGACCAC CCACCCGTTT GATACTCGCC GCGGTGAATT GGCCCCGCAG
CCCGTAGGTT AG
 
Protein sequence
MTPRGPGRLQ RLSQCRPQRG SGGPARGLRQ LALAAMLGAL AVTVSGCSWS EALGIGWPEG 
ITPEAHLNRE LWIGAVIASL AVGVIVWGLI FWSAVFHRKK NTDTELPRQF GYNMPLELVL
TVIPFLIISV LFYFTVVVQE KMLQIAKDPE VVIDITSFQW NWKFGYQRVN FKDGTLTYDG
ADPERKRAMV SKPEGKDKYG EELVGPVRGL NTEDRTYLNF DKVETLGTST EIPVLVLPSG
KRIEFQMASA DVIHAFWVPE FLFKRDVMPN PVANNSVNVF QIEEITKTGA FVGHCAEMCG
TYHSMMNFEV RVVTPNDFKA YLQQRIDGKT NAEALRAINQ PPLAVTTHPF DTRRGELAPQ
PVG