| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12218 |
|---|
| Symbol | |
|---|
| ID | 5222894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2464318 |
|---|
| End bp | 2465499 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640606974 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001288151 |
|---|
| Protein GI | 148823397 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 314 |
|---|
| Plasmid unclonability p-value | 0.327955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 232 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTT TAAGGAAGCA AATTTTGAGG CTCGACCAGA GGTGGTTGAT CGCGCGTGTA
ATCATGCGGT CCGCCATAGG TTTCTTTGCG AGCTTCACCG TCTCCTCCGG CGTCCTGGCC
GCGAATGTGC TGGCTGATCC GGCCGACGAC GCGCTGGCCA AGCTCAACGA GTTATCCCGG
CAGGCCGAGC AGACCACCGA GGCGCTGCAC AGTGCGCAGC TGGATCTCAA CGAAAAGCTC
GCTGCCCAGC GGGCCGCCGA CCAGAAGCTT GCGGACAACA GAACGGCCTT GGATGCTGCG
AGAGCACGCT TGGCGACTTT TCAGACGGCG GTGAACAAGG TCGCGGCCGC TACCTACATG
GGTGGTCGTA CCCACGGCAT GGATGCGATC CTGACGGCGG AGTCCCCGCA ACTGTTGATC
GATCGGCTAT CGGTACAGCG GGTGATGGCG CATCAAATGT CCACGCAGAT GGCCCGTTTC
AAGGCCGCTG GAGAACAGGC CGTCAAGGCC GAGCAGGCTG CAGCCAAATC GGCGGCCGAT
GCCAGGTCCG CGGCCGAGCA AGCTGCCGCG GTACGAGCGA ATCTGCAGCA CAAACAGAGC
CAGCTGCAGG TGCAGATTGC CGTCGTCAAG TCGCAATACG TCGCGTTGAC GCCGGAGGAG
CGCACGGCCC TCGCTGATCC AGGACCGGTC CCGGCGGTTG CTGCGATCGC CCCCGGGGCC
CCACCTGCGG CGTTGCCGCC CGGTGCGCCG CCTGGCGACG GCCCGGCGCC TGGCGTGGCG
CCGCCGCCTG GTGGGATGCC CGGATTGCCT TTCGTGCAGC CCGACGGCGC TGGCGGCGAC
CGTACGGCCG TTGTCCAAGC GGCGTTGACG CAGGTCGGCG CGCCCTACGC GTGGGGTGGT
GCCGCGCCCG GCGGGTTCGA CTGCTCAGGC TTGGTGATGT GGGCGTTCCA GCAGGCTGGT
ATCGCGTTAC CGCACTCCAG CCAGGCGCTG GCTCACGGTG GTCAGCCGGT CGCGTTGTCG
GATCTGCAGC CCGGCGACGT GTTGACCTTC TATTCCGACG CGTCACACGC AGGCATCTAC
ATCGGTGATG GTCTTATGGT TCATTCCTCC ACCTACGGTG TTCCGGTGCG GGTGGTGCCG
ATGGACTCGT CGGGGCCGAT CTACGACGCC CGCCGTTACT GA
|
|---|
| Protein sequence | MARLRKQILR LDQRWLIARV IMRSAIGFFA SFTVSSGVLA ANVLADPADD ALAKLNELSR
QAEQTTEALH SAQLDLNEKL AAQRAADQKL ADNRTALDAA RARLATFQTA VNKVAAATYM
GGRTHGMDAI LTAESPQLLI DRLSVQRVMA HQMSTQMARF KAAGEQAVKA EQAAAKSAAD
ARSAAEQAAA VRANLQHKQS QLQVQIAVVK SQYVALTPEE RTALADPGPV PAVAAIAPGA
PPAALPPGAP PGDGPAPGVA PPPGGMPGLP FVQPDGAGGD RTAVVQAALT QVGAPYAWGG
AAPGGFDCSG LVMWAFQQAG IALPHSSQAL AHGGQPVALS DLQPGDVLTF YSDASHAGIY
IGDGLMVHSS TYGVPVRVVP MDSSGPIYDA RRY
|
|---|
| |