| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12185 |
|---|
| Symbol | murD |
|---|
| ID | 5222861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 2428495 |
|---|
| End bp | 2429955 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640606941 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_001288118 |
|---|
| Protein GI | 148823364 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 187 |
|---|
| Plasmid unclonability p-value | 0.000000000000362419 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 225 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGACC CTCTGGGGCC GGGTGCGCCC GTGTTGGTAG CCGGTGGCCG GGTGACCGGT
CAGGCGGTGG CCGCGGTGCT GACTCGGTTT GGTGCGACGC CGACGGTGTG CGACGACGAT
CCGGTCATGC TGCGACCGCA CGCCGAACGT GGGCTGCCGA CCGTTAGTTC CTCGGACGCG
GTGCAGCAGA TAACCGGGTA TGCGCTGGTG GTCGCCAGTC CCGGCTTCTC GCCCGCAACC
CCGCTACTGG CCGCGGCCGC GGCGGCGGGG GTGCCGATCT GGGGTGACGT GGAGTTAGCC
TGGCGGCTAG ACGCAGCGGG CTGCTACGGA CCGCCGCGCA GCTGGCTGGT GGTGACCGGC
ACCAACGGCA AGACCACCAC GACGTCGATG CTGCACGCCA TGCTGATCGC CGGTGGCCGC
CGCGCCGTGC TGTGCGGCAA TATCGGCAGT GCGGTGCTGG ATGTGCTGGA CGAGCCGGCC
GAGCTGCTGG CCGTGGAGTT GTCCAGTTTC CAGCTGCACT GGGCGCCGTC GCTGCGGCCC
GAGGCCGGCG CGGTGCTCAA CATTGCCGAA GACCACCTGG ACTGGCATGC CACGATGGCC
GAATACACCG CGGCCAAGGC CCGGGTGCTG ACCGGCGGGG TAGCGGTGGC CGGGCTGGAT
GACAGCCGAG CGGCCGCACT GCTGGACGGC TCACCGGCGC AGGTGCGGGT CGGCTTCCGG
CTCGGCGAGC CGGCCGCGGG GGAACTGGGC GTGCGCGACG CCCACCTGGT CGATCGCGCC
TTCTCCGACG ACTTGACGCT GCTGCCGGTC GCGTCGATAC CGGTGCCAGG TCCGGTCGGC
GTGCTTGACG CCCTGGCCGC GGCGGCGCTG GCCCGCTCGG TCGGGGTGCC CGCCGGTGCG
ATCGCCGACG CGGTCACGTC GTTTCGAGTG GGCCGACACC GCGCCGAGGT GGTGGCCGTT
GCCGACGGCA TCACCTACGT GGACGACTCC AAGGCCACCA ACCCGCACGC CGCGCGGGCT
TCGGTGCTTG CATACCCGAG GGTGGTATGG ATCGCCGGTG GCCTGCTCAA GGGCGCGTCG
CTTCACGCCG AGGTTGCGGC GATGGCGTCG CGGCTGGTCG GTGCGGTGCT GATCGGCCGG
GATCGCGCAG CGGTTGCCGA GGCGTTATCA CGACACGCGC CCGATGTCCC AGTCGTTCAG
GTTGTGGCAG GCGAGGATAC TGGTATGCCT GCGACTGTTG AGGTTCCTGT TGCTTGTGTT
CTAGATGTGG CAAAAGATGA CAAAGCCGGT GAGACCGTTG GCGCTGCCGT GATGACCGCT
GCGGTGGCCG CGGCCCGGCG GATGGCCCAA CCCGGTGACA CCGTGCTGCT GGCACCGGCC
GGCGCCTCAT TCGACCAGTT CACCGGTTAT GCCGACCGGG GCGAGGCATT CGCGACCGCG
GTCCGCGCGG TGATCCGGTA G
|
|---|
| Protein sequence | MLDPLGPGAP VLVAGGRVTG QAVAAVLTRF GATPTVCDDD PVMLRPHAER GLPTVSSSDA
VQQITGYALV VASPGFSPAT PLLAAAAAAG VPIWGDVELA WRLDAAGCYG PPRSWLVVTG
TNGKTTTTSM LHAMLIAGGR RAVLCGNIGS AVLDVLDEPA ELLAVELSSF QLHWAPSLRP
EAGAVLNIAE DHLDWHATMA EYTAAKARVL TGGVAVAGLD DSRAAALLDG SPAQVRVGFR
LGEPAAGELG VRDAHLVDRA FSDDLTLLPV ASIPVPGPVG VLDALAAAAL ARSVGVPAGA
IADAVTSFRV GRHRAEVVAV ADGITYVDDS KATNPHAARA SVLAYPRVVW IAGGLLKGAS
LHAEVAAMAS RLVGAVLIGR DRAAVAEALS RHAPDVPVVQ VVAGEDTGMP ATVEVPVACV
LDVAKDDKAG ETVGAAVMTA AVAAARRMAQ PGDTVLLAPA GASFDQFTGY ADRGEAFATA
VRAVIR
|
|---|
| |