Gene TBFG_12169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12169 
Symbol 
ID5222844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2412281 
End bp2413354 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content69% 
IMG OID640606924 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_001288102 
Protein GI148823348 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones433 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones198 
Fosmid unclonability p-value0.385563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCCC TGGTGCGTCG GCTGTTGTTC CTGATCCCAC CCGAGCACGC GCACAAGTTG 
GTTTTCGCCG TGCTGCGCGG CGTGGCCGCC GTGGCGCCAG TGCGCCGGCT CTTGCGCCGA
CTGCTGGGCC CGACGGATCC GGTGCTGGCC AGCACGGTGT TCGGGGTGCG CTTCCCGGCA
CCGCTCGGGC TGGCCGCGGG GTTCGACAAG GACGGCACCG CACTATCCAG TTGGGGTGCG
ATGGGGTTCG GCTACGCCGA GATCGGCACC GTCACCGCTC ATCCGCAGCC CGGCAACCCG
GCCCCCCGCC TGTTCCGGCT GGCCGACGAC CGCGCCCTGC TGAACCGGAT GGGGTTCAAC
AATCACGGTG CCCGGGCACT GGCGATCCGA CTCGCGCGGC ACCGACCCGA GATCCCGATC
GGGGTGAATA TCGGCAAGAC CAAGAAAACG CCGGCCGGCG ACGCGGTCAA CGACTACCGG
GCCAGCGCCC GGATGGTCGG CCCGCTGGCG TCGTATCTGG TGGTCAACGT CAGCTCTCCG
AACACACCGG GGTTACGCGA TCTGCAGGCG GTCGAATCGC TGCGGCCCAT CCTGTCTGCC
GTCCGCGCCG AGACTTCGAC GCCGGTGCTG GTGAAGATCG CGCCGGACTT GTCCGATTCC
GACCTCGACG ACATCGCGGA CCTGGCCGTC GAGCTAGACC TGGCCGGCAT CGTGGCAACC
AACACCACGG TGTCACGCGA CGGCCTGACC ACACCGGGGG TCGACCGGTT GGGTCCCGGC
GGCATCTCGG GGCCACCGCT GGCTCAGCGC GCGGTCCAGG TGCTGCGTCG GCTCTATGAC
CGGGTCGGTG ATCGATTGGC GCTGATCAGC GTGGGCGGGA TCGAGACGGC CGACGACGCG
TGGGAGCGCA TCACAGCGGG CGCATCGCTG CTACAGGGCT ATACCGGCTT CATCTACGGC
GGGGAACGGT GGGCCAAGGA CATCCATGAA GGCATTGCCC GCAGGCTGCA TGACGGCGGG
TTCGGCTCGC TGCACGAAGC GGTCGGCTCG GCAAGACGTC GGCAACCCAG CTAA
 
Protein sequence
MYPLVRRLLF LIPPEHAHKL VFAVLRGVAA VAPVRRLLRR LLGPTDPVLA STVFGVRFPA 
PLGLAAGFDK DGTALSSWGA MGFGYAEIGT VTAHPQPGNP APRLFRLADD RALLNRMGFN
NHGARALAIR LARHRPEIPI GVNIGKTKKT PAGDAVNDYR ASARMVGPLA SYLVVNVSSP
NTPGLRDLQA VESLRPILSA VRAETSTPVL VKIAPDLSDS DLDDIADLAV ELDLAGIVAT
NTTVSRDGLT TPGVDRLGPG GISGPPLAQR AVQVLRRLYD RVGDRLALIS VGGIETADDA
WERITAGASL LQGYTGFIYG GERWAKDIHE GIARRLHDGG FGSLHEAVGS ARRRQPS