Gene TBFG_12123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12123 
Symbol 
ID5222798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2360382 
End bp2362151 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content65% 
IMG OID640606878 
Producttransmembrane serine/threonine-protein kinase J pknJ 
Protein accessionYP_001288056 
Protein GI148823302 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones238 
Plasmid unclonability p-value0.0224799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones204 
Fosmid unclonability p-value0.854648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCACG AGTTGAGTGC GGGTTCGGTT TTTGCCGGGT ACCGGATAGA GCGGATGCTA 
GGTGCCGGCG GAATGGGCAC CGTATATCTG GCGCGTAATC CCGATCTGCC GCGTAGCGAA
GCCTTGAAAG TCCTTGCTGC GGAGTTGTCG CGTGACCTCG ATTTTCGGGC ACGGTTTGTC
CGCGAAGCCG ATGTGGCCGC GGGGTTGGAT CATCCCAACA TCGTGGCGGT TCATCAGCGC
GGCCAGTTCG AGGGTCGGCT ATGGATTGCG ATGCAGTTCG TCGATGGCGG GAACGCTGAG
GATGCGCTGC GGGCGGCGAC CATGACCACA GCGCGGGCGG TGTACGTGAT CGGCGAGGTC
GCCAAGGCGC TCGACTATGC GCACCAACAA GGCGTGATAC ATCGCGATAT CAAGCCGGCG
AACTTCTTGT TGTCGCGAGC CGCTGGCGGC GATGAACGAG TGCTGCTAAG CGATTTTGGG
ATCGCGCGTG CGCTCGGCGA CACGGGACTG ACGTCCACCG GTTCGGTGCT GGCCACGTTG
GCCTATGCTG CGCCGGAAGT TCTTGCAGGG CAAGGTTTTG ATGGCCGGGC CGATTTGTAT
TCGTTGGGGT GTGCCCTATT TCGGCTACTA ACCGGTGAGG CGCCGTTTGC CGCCGGTGCT
GGAGCGGCGG TGGCAGTGGT GGCGGGTCAT CTGCACCAAC CGCCGCCGAC GGTCAGCGAT
CGCGTGCCAG GGCTGTCGGC GGCGATGGAT GCGGTGATCG CCACTGCGAT GGCCAAGGAT
CCCATGCGTC GGTTCACCTC AGCGGGTGAA TTCGCACATG CCGCCGCCGC AGCCCTGTAC
GGGGGAGCCA CCGACGGATG GGTGCCGCCG AGCCCCGCGC CGCACGTCAT ATCGCAAGGC
GCCGTGCCAG GTTCGCCGTG GTGGCAGCAT CCGGTCGGGT CAGTGACCGC GTTGGCCACG
CCGCCCGGTC ACGGTTGGCC GCCAGGCCTG CCGCCGCTGC CGAGACGACC GCGCCGCTAC
CGTCGGGGCG TGGCGGCGGT GGCGGCCGTG ATGGTGGTGG CCGCCGCGGC CGTCACCGCG
GTGACCATGA CATCGCACCA ACCGCGGACC GCGACGCCGC CAAGCGCTGC AGCCCTTTCT
CCCACCTCGT CCAGCACAAC ACCACCGCAA CCACCGATCG TGACAAGGTC GCGCCTACCC
GGGTTGTTGC CGCCCCTTGA TGACGTCAAA AACTTCGTGG GCATCCAGAA CCTGGTCGCC
CATGAGCCAA TGCTTCAACC CCAGACTCCC AACGGGTCAA TCAACCCCGC GGAGTGCTGG
CCGGCGGTTG GGGGTGGCGT TCCTAGCGCC TACGACCTGG GGACCGTCAT CGGCTTTTAC
GGGTTGACAA TCGACGAGCC GCCCACCGGG ACTGCCCCAA ATCAAGTGGG GCAACTGATC
GTGGCCTTTC GCGACGCGGC CACAGCCCAA AGGCATTTGG CCGATTTGGC GTCGATCTGG
CGCCGATGCG GGGGTCGAAC CGTAACACTC TTCCGTAGTG AGTGGCGAAG GCCCGTTGAA
CTGTCGACGA GCGTTCCCGA AGTCGTTGAT GGCATCACCA CCATGGTGTT GACGGCGCAG
GGACCGGTGC TACGAGTCCG CGAAGACCAT GCGATCGCCG CGAAGAATAA TGTGCTTGTC
GATGTCGACA TCATGACGCC CGACACCAGC CGCGGCCAGC AGGCGGTCAT CGGCATCACC
AACTACATCC TCGCCAAGAT ACCCGGCTGA
 
Protein sequence
MAHELSAGSV FAGYRIERML GAGGMGTVYL ARNPDLPRSE ALKVLAAELS RDLDFRARFV 
READVAAGLD HPNIVAVHQR GQFEGRLWIA MQFVDGGNAE DALRAATMTT ARAVYVIGEV
AKALDYAHQQ GVIHRDIKPA NFLLSRAAGG DERVLLSDFG IARALGDTGL TSTGSVLATL
AYAAPEVLAG QGFDGRADLY SLGCALFRLL TGEAPFAAGA GAAVAVVAGH LHQPPPTVSD
RVPGLSAAMD AVIATAMAKD PMRRFTSAGE FAHAAAAALY GGATDGWVPP SPAPHVISQG
AVPGSPWWQH PVGSVTALAT PPGHGWPPGL PPLPRRPRRY RRGVAAVAAV MVVAAAAVTA
VTMTSHQPRT ATPPSAAALS PTSSSTTPPQ PPIVTRSRLP GLLPPLDDVK NFVGIQNLVA
HEPMLQPQTP NGSINPAECW PAVGGGVPSA YDLGTVIGFY GLTIDEPPTG TAPNQVGQLI
VAFRDAATAQ RHLADLASIW RRCGGRTVTL FRSEWRRPVE LSTSVPEVVD GITTMVLTAQ
GPVLRVREDH AIAAKNNVLV DVDIMTPDTS RGQQAVIGIT NYILAKIPG