| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_12002 |
|---|
| Symbol | |
|---|
| ID | 5222679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 2223511 |
|---|
| End bp | 2224824 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640606759 |
|---|
| Product | MCE-family protein mce3F |
|---|
| Protein accession | YP_001287939 |
|---|
| Protein GI | 148823185 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 255 |
|---|
| Plasmid unclonability p-value | 0.000281764 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 212 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCATC TACCGCGCCG AGTGATCGTT CAGCTGGCCG TCTTTACCGT GATCGCGGTG
GGCGTGCTGG CCATCACGTT CCTGCATTTC GTGAGGCTGC CGGCGATGCT TTTCGGCGTC
GGCCGCTACA CGGTGACGAT GGAGCTGGTC GAAGCCGGTG GGCTGTATCG CACCGGCAAT
GTCACCTACC GCGGCTTTGA GGTGGGCCGG GTGGCAGCGG TGCGGCTCAC CGACACCGGG
GTGCAAGCGG TGCTGGCCCT GAAATCGGGC ATCGATATCC CGTCGGACCT CAAGGCCGAG
GTGCACAGCC ACACCGCGAT CGGCGAAACC TACGTCGAGT TGTTGCCGCG CAACGCCGCC
TCGCCGCCAC TGAAGAACGG CGATGTCATT GCGCTGGCCG ACACCTCGGT GCCGCCCGAC
ATCAACGACC TGCTCAGCGC GGCCAACACC GCATTGGAGG CAATACCTCA CGAGAACCTG
CAGACCGTCA TCGACGAGTC GTACACCGCG GTGGCCGGGT TAGGGCTCGA ACTTTCCCGG
CTGATCAAGG GCTCGGCGGA ACTGGCGATC GATGCTCGCG CGAATCTCGA TCCGCTGGTG
GCGCTGATCG ACCGGGCAGG ACCGGTGCTG GATTCGCAGA CCCACACCTC GGATGCGATC
GCGGCCTGGG CGGCACAGCT GGCCGCAGTC ACCGGCCAAT TGCAGACACA CGACTCGGCG
GTCGGCGATC TCATCGACCG GGGCGGTCCG GCGTTGGGGG AGACGCGCCA ACTGCTCGAG
CGGCTACAAC CCACCGTGCC CATCCTGCTG GCCAACCTGG TCAGCGTCGG CCAGGTCGCA
CTCACCTATC ACAACGACAT CGAACAGCTG CTGGTGGTGT TCCCCATGGC CATCGCCGCC
GAACAGGCCG GCATCCTGGC CAACCTCAAC ACCAAGCAGG CCTACCGGGG CCAGTATCTG
AGCTTCAACC TCAACCTGAA CCTGCCGCCG CGGTGCACCA CCGGCTTTCT GCCGGCCCAG
CAGCGGCGCA TTCCCACGTT CGAGGACTAC CCGGATCGCC CGGCCGGTGA TCTGTACTGC
CGGGTGCCCC AGGATTCGCC GTTTAACGTG CGCGGCGCCC GCAACATCCC CTGTGAAACC
GTGCCGGGCA AGCGCGCACC CACCGTGAAG TTATGCGAGA GCGACGAGCC ATACCTGCCG
CTGAACGACG GCTACAACTG GAAGGGCGAC CCCAACGCCA CGGTGCCGGG TTTGGGGTCC
GGCCAGGACA TCCCGCAGAC ATGGCAAACG ATGCTGCTGC CGCCGGGCAG CTGA
|
|---|
| Protein sequence | MLHLPRRVIV QLAVFTVIAV GVLAITFLHF VRLPAMLFGV GRYTVTMELV EAGGLYRTGN
VTYRGFEVGR VAAVRLTDTG VQAVLALKSG IDIPSDLKAE VHSHTAIGET YVELLPRNAA
SPPLKNGDVI ALADTSVPPD INDLLSAANT ALEAIPHENL QTVIDESYTA VAGLGLELSR
LIKGSAELAI DARANLDPLV ALIDRAGPVL DSQTHTSDAI AAWAAQLAAV TGQLQTHDSA
VGDLIDRGGP ALGETRQLLE RLQPTVPILL ANLVSVGQVA LTYHNDIEQL LVVFPMAIAA
EQAGILANLN TKQAYRGQYL SFNLNLNLPP RCTTGFLPAQ QRRIPTFEDY PDRPAGDLYC
RVPQDSPFNV RGARNIPCET VPGKRAPTVK LCESDEPYLP LNDGYNWKGD PNATVPGLGS
GQDIPQTWQT MLLPPGS
|
|---|
| |