| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11970 |
|---|
| Symbol | |
|---|
| ID | 5222647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 2201919 |
|---|
| End bp | 2202689 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640606727 |
|---|
| Product | short-chain type dehydrogenase/reductase |
|---|
| Protein accession | YP_001287907 |
|---|
| Protein GI | 148823153 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 362 |
|---|
| Plasmid unclonability p-value | 0.675496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 203 |
|---|
| Fosmid unclonability p-value | 0.543432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACCATC CAGACCTGGC CGGCAAGGTC GCGATCGTTA CTGGGGCGGG CGCCGGAATC
GGTCTGGCGG TTGCCCGGCG ACTCGCCGAC GAGGGCTGCC ATGTGCTGTG CGCGGACATC
GATGGTGATG CCGCGGATGC CGCGGCCACC AAAATCGGTT GTGGCGCAGC GGCCTGCCGG
GTTGACGTCA GCGACGAACA ACAGATCATC GCCATGGTCG ACGCCTGTGT TGCCGCGTTC
GGCGGGGTGG ACAAGTTGGT CGCCAACGCC GGTGTCGTTC ATCTGGCTTC GCTCATCGAC
ACCACCGTCG AGGACTTCGA TCGGGTCATC GCGATCAATC TCCGCGGCGC CTGGCTGTGC
ACCAAGCATG CGGCACCGCG GATGATCGAG CGCGGCGGGG GAGCCATTGT CAACCTGTCG
TCGTTAGCGG GCCAGGTAGC GGTGGGCGGC ACCGGCGCAT ACGGCATGTC GAAGGCCGGC
ATCATCCAGC TCAGCCGCAT CACCGCCGCC GAACTGCGCT CGTCGGGCAT CCGCTCCAAC
ACGCTGCTGC CCGCATTCGT CGACACCCCG ATGCAGCAGA CCGCCATGGC AATGTTCGAC
GGGGCCCTGG GCGCGGGGGG TGCGCGCTCG ATGATTGCCC GGCTGCAGGG CCGCATGGCC
GCACCGGAGG AGATGGCCGG CATCGTGGTG TTCCTGCTGT CCGACGATGC GTCGATGATC
ACCGGCACCA CCCAGATCGC CGACGGCGGG ACGATTGCCG CGCTGTGGTG A
|
|---|
| Protein sequence | MNHPDLAGKV AIVTGAGAGI GLAVARRLAD EGCHVLCADI DGDAADAAAT KIGCGAAACR
VDVSDEQQII AMVDACVAAF GGVDKLVANA GVVHLASLID TTVEDFDRVI AINLRGAWLC
TKHAAPRMIE RGGGAIVNLS SLAGQVAVGG TGAYGMSKAG IIQLSRITAA ELRSSGIRSN
TLLPAFVDTP MQQTAMAMFD GALGAGGARS MIARLQGRMA APEEMAGIVV FLLSDDASMI
TGTTQIADGG TIAALW
|
|---|
| |