Gene TBFG_11960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11960 
Symbol 
ID5222637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2190715 
End bp2191506 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID640606717 
Producttranscriptional regulator 
Protein accessionYP_001287897 
Protein GI148823143 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones329 
Plasmid unclonability p-value0.0515567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones204 
Fosmid unclonability p-value0.606588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAA GAGTGGTTAT CGTGGGATTC CCCGGCGACC CCGTCGACAC CGTGATCCTG 
CCCGGTGGCG CCGGAGTCGA TGCCGCACGG TCCGAACCGG CCCTCATCGA CTGGGTCAAA
GCCGTCTCCG GCACCGCCCG CCGCGTCGTC ACCGTGTGCA CGGGCGCGTT TCTTGCGGCC
GAAGCGGGGT TGTTGGGACG GACACCGAGC GACGACGCAC TGGGCCTTTG CCGAACATTT
CGCCCGCGAA TTTCCGGCCG TTCGGGTCGA TGCCGACCCG ATCTTCATGC GCAGTTCGCA
GAAGGTGTGG ACCGCGGCTG GAGTCACCGC CGGCATCGAC CTCGCGCTGG CACTGGTCGA
AGACGACCAC GGCACCGAGA TTGCCCAGAC GGTTGCCCGC TGGCTCGTCC TGTATCTGCG
CCGACCCGGT GGGCAGACCC AGTTCGCGGC TCCGGTGTGG ATGCCACGCG CCAAACGGAC
CTCGATCCGC CGGGTGCAGG AGGCCATCGA GGCCGAGCCG GGGGCGCGCA CCGCATCGGC
GAACTGGCTC AACGTGCGGC CATGAGCCCG CGTCATTTCA CTCGGGTGTT CAGCGACGAG
GTCGGCGAGG CGCCCGGCCG GTACGTCGAA CGCATCCGCA CCGAGGCTGC GCGCCGCCAG
TTGGAGGAGA CCCACGACAC CGTGGTGGCA ATTGCCGCCC GATGCGGCTT CGGGACCGCG
GAAACCATGC GCCGCAGCTT CATTCGCCGC GTCGGGATAT CACCCGACCA ATACCGCAAA
GCCTTCGCCT GA
 
Protein sequence
MARRVVIVGF PGDPVDTVIL PGGAGVDAAR SEPALIDWVK AVSGTARRVV TVCTGAFLAA 
EAGLLGRTPS DDALGLCRTF RPRISGRSGR CRPDLHAQFA EGVDRGWSHR RHRPRAGTGR
RRPRHRDCPD GCPLARPVSA PTRWADPVRG SGVDATRQTD LDPPGAGGHR GRAGGAHRIG
ELAQRAAMSP RHFTRVFSDE VGEAPGRYVE RIRTEAARRQ LEETHDTVVA IAARCGFGTA
ETMRRSFIRR VGISPDQYRK AFA