Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11960 |
Symbol | |
ID | 5222637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2190715 |
End bp | 2191506 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640606717 |
Product | transcriptional regulator |
Protein accession | YP_001287897 |
Protein GI | 148823143 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 329 |
Plasmid unclonability p-value | 0.0515567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 204 |
Fosmid unclonability p-value | 0.606588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAA GAGTGGTTAT CGTGGGATTC CCCGGCGACC CCGTCGACAC CGTGATCCTG CCCGGTGGCG CCGGAGTCGA TGCCGCACGG TCCGAACCGG CCCTCATCGA CTGGGTCAAA GCCGTCTCCG GCACCGCCCG CCGCGTCGTC ACCGTGTGCA CGGGCGCGTT TCTTGCGGCC GAAGCGGGGT TGTTGGGACG GACACCGAGC GACGACGCAC TGGGCCTTTG CCGAACATTT CGCCCGCGAA TTTCCGGCCG TTCGGGTCGA TGCCGACCCG ATCTTCATGC GCAGTTCGCA GAAGGTGTGG ACCGCGGCTG GAGTCACCGC CGGCATCGAC CTCGCGCTGG CACTGGTCGA AGACGACCAC GGCACCGAGA TTGCCCAGAC GGTTGCCCGC TGGCTCGTCC TGTATCTGCG CCGACCCGGT GGGCAGACCC AGTTCGCGGC TCCGGTGTGG ATGCCACGCG CCAAACGGAC CTCGATCCGC CGGGTGCAGG AGGCCATCGA GGCCGAGCCG GGGGCGCGCA CCGCATCGGC GAACTGGCTC AACGTGCGGC CATGAGCCCG CGTCATTTCA CTCGGGTGTT CAGCGACGAG GTCGGCGAGG CGCCCGGCCG GTACGTCGAA CGCATCCGCA CCGAGGCTGC GCGCCGCCAG TTGGAGGAGA CCCACGACAC CGTGGTGGCA ATTGCCGCCC GATGCGGCTT CGGGACCGCG GAAACCATGC GCCGCAGCTT CATTCGCCGC GTCGGGATAT CACCCGACCA ATACCGCAAA GCCTTCGCCT GA
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Protein sequence | MARRVVIVGF PGDPVDTVIL PGGAGVDAAR SEPALIDWVK AVSGTARRVV TVCTGAFLAA EAGLLGRTPS DDALGLCRTF RPRISGRSGR CRPDLHAQFA EGVDRGWSHR RHRPRAGTGR RRPRHRDCPD GCPLARPVSA PTRWADPVRG SGVDATRQTD LDPPGAGGHR GRAGGAHRIG ELAQRAAMSP RHFTRVFSDE VGEAPGRYVE RIRTEAARRQ LEETHDTVVA IAARCGFGTA ETMRRSFIRR VGISPDQYRK AFA
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