Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11834 |
Symbol | |
ID | 5222511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2053175 |
End bp | 2055127 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640606591 |
Product | PE-PGRS family protein |
Protein accession | YP_001287771 |
Protein GI | 148823017 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 216 |
Plasmid unclonability p-value | 0.00239965 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 223 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCCC CATGCGACGA CAACGGCCAG GAGGTGTGGA CGTCGCAGAT GATCGTGGCG CCGGCGTTTG TCGATGCAGC GGCAAAGGAC CTAGCAACTA TTGGTTCGGC GATTAGCCGG GCCAACGCCG AAGCGTTGGT CCCGATAACG GCGTTACTGC CTGCGGGCGC TGACGACGTG TCGGCTGCGA TTGCGGCGCT GTTCGCAACG CACGGGCAGG CATACCAGGA GCTCAGTGCC CACGCGGTCG CATTCCATGA GCAGTTCGTC CAGCTCATGA GCGCGGGGGC GGCCCAGTAC GCCAGCGCCG AGGCAGCCAA CTCGTCACCA TTGCAAATCG TGGGCCAAAC CGCCCTCGAT GCCATCAATT CACCCGTGCA GACGCTGACC GGGCGTCCGC TTATCGGCAA CGGTGCCAAC GGGGTCGCAG GAACCGGGCA AAACGGTGGC GATGGCGGAT GGCTATACGG CAACGGTGGC AACGGCGGGT CCGGCGGGAC GGGCCAAAAT GGCGGCAACG GCGGGTCGGC TGGGCTATGG GGTAGCGGCG GCAATGGCGG CCAGGGCGGG GCGGGTGCCA ACGGCGCAGC CGGTCAACCC GGGAAAGCGG GCGGGTCCGG CGGCAACGGC GGCGCCGGTG GATGGATCTA TGGTCACGGT GGACATGGTG GGGCCGGCGG AAACGGGGGC AACGCCACAG CGCCCGGGGG TGCGTCGGCA GGCTTCGATG GGGGCGCCGG CGGAAACGGG GGTTCGGGTG GTCGCGGTGG ACTGTTGTTC GGCAACGGCG GCAACGGCTC GGTCGGTGGC ATGGGAGGAC AAGGCACTAA TGACACAGCC GGAGATTCGG CCGGCAGCGG CGGATTAGGA GGCAACGGGG GCAACGGCGC CCAGGGCGGG TGGCTGATCG GCAACGGGGG GCAAGGTGGG GACAGCGGCG CCGGCGGCGG CACCGACTCC ACTCAAACGG GCGTCATGAA CGGCGCTTCC GGCGGTTCGG CCGGGATAGC CGGTAACGGC GGTGACGCGG GCCTAGTCGG CAACGGCGGG GCCGGTGGCA ACGGCGGGAA TGGAGCGGCC GGGTCTGCGC TGGGTACTAC CATCTTCGGC GGGAGCGGCG GGGTCGGTGG CTCAGGCGGC GACGGCGGCA ACGGCGGGTG GTTGTTCGGC AGCGGCGCGT CCGGCGGCAA CGGGGGTCAG GGCGGTGACG CAGGCACCAA CGGATTTGCG GGCTTTGGCG GCTCTGCTGG CGGTGGCGGC TGGGTAGGTG CCGTTAACTT CGGACCGATT AGTGTCCAGG GTTTTGGGTT GTTTGGTCAC GGCGGTGACG GTGGCAACGG TGGTGACGTT GGGGCCGGCA GCCTCAGCAT TCAATTTGGT GCATCAGGGG GTGACGGCGG CCAAGGTGGG GTGCTATACG GCAATGGCGG CAACGGTGGT AACGCCGGCA GCGGCGGAGG TACCGGCTTC GAAGGCAGCG CCGGCCAGGG TGGCGCCGCC ATTCTGATCG GCAACGGCGG GGCCGGAGGG AATGGGGCGA CCGGTGGGAC CGGAGTAGGC AACATCATTC AGGAAGCCGG AGGTGACGGC AGCGACGGTG GCGCGGGCGG CAGCGGAGGC CTACTGTTCG GTAGCGGCGG GGCCGGCGGC ATCGGCGGGG CCGGCGGCGT CGGCGGGTCG GGCAACGACG GCGGCAACGG CGGCGATGGT GGCCAAGGCG GGGCAAGCGG CCTGGGGATC GGCAACGGCG GACCCGGGGG AAGTGGCGGT ACCGGTGGGG CCGGCGGAAC CGGCGGCAGT GCGGGCACTG GCGGTGCCGG CGGTGACGGT GGTAACGCCG CCCTGCTGAT CGGTACCGGT GGCGACGGCG GAGATGGTGT CCCACCCGCA CCCGGGGGCC AAGGCGGCAA GGGCGGATTG ATCGGTTTGC CTGGGCAGAA CGGGCAGCCG TAG
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Protein sequence | MDSPCDDNGQ EVWTSQMIVA PAFVDAAAKD LATIGSAISR ANAEALVPIT ALLPAGADDV SAAIAALFAT HGQAYQELSA HAVAFHEQFV QLMSAGAAQY ASAEAANSSP LQIVGQTALD AINSPVQTLT GRPLIGNGAN GVAGTGQNGG DGGWLYGNGG NGGSGGTGQN GGNGGSAGLW GSGGNGGQGG AGANGAAGQP GKAGGSGGNG GAGGWIYGHG GHGGAGGNGG NATAPGGASA GFDGGAGGNG GSGGRGGLLF GNGGNGSVGG MGGQGTNDTA GDSAGSGGLG GNGGNGAQGG WLIGNGGQGG DSGAGGGTDS TQTGVMNGAS GGSAGIAGNG GDAGLVGNGG AGGNGGNGAA GSALGTTIFG GSGGVGGSGG DGGNGGWLFG SGASGGNGGQ GGDAGTNGFA GFGGSAGGGG WVGAVNFGPI SVQGFGLFGH GGDGGNGGDV GAGSLSIQFG ASGGDGGQGG VLYGNGGNGG NAGSGGGTGF EGSAGQGGAA ILIGNGGAGG NGATGGTGVG NIIQEAGGDG SDGGAGGSGG LLFGSGGAGG IGGAGGVGGS GNDGGNGGDG GQGGASGLGI GNGGPGGSGG TGGAGGTGGS AGTGGAGGDG GNAALLIGTG GDGGDGVPPA PGGQGGKGGL IGLPGQNGQP
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