Gene TBFG_11820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11820 
Symbol 
ID5222498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2036678 
End bp2037730 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID640606578 
ProductPPE family protein 
Protein accessionYP_001287759 
Protein GI148823005 
COG category[N] Cell motility 
COG ID[COG5651] PPE-repeat proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones321 
Plasmid unclonability p-value0.261988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones225 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCG GGGCGTTACC GCCGGAGATC AATTCGGGCC GTATGTATTG CGGTCCGGGG 
TCGGGGCCGA TGCTGGCTGC GGCCGCGGCC TGGGACGGGG TGGCCGTGGA GTTGGGGTTG
GCTGCGACCG GTTATGCGTC GGTGATAGCC GAGCTGACCG GTGCGCCGTG GGTGGGTGCG
GCGTCGTTGT CGATGGTGGC GGCGGCCACG CCGTATGTGG CCTGGCTGAG CCAAGCCGCG
GCGCGGGCCG AGCAGGCGGG GATGCAGGCC GCGGCGGCCG CGGCGGCTTA TGAGGCCGCT
TTTGTGATGA CGGTGCCGCC GCCGGTGATT ACGGCGAATC GGGTTTTGGT GATGACGCTG
ATTGCGACCA ATTTTTTCGG TCAGAACTCG GCGGCGATCG CGGTCGCTGA GGCGCAGTAC
GCCGAAATGT GGGCGCAAGA CGCCGTTGCT ATGTATGGCT ATGCGGCTGC GTCGGCGAGC
GCGTCGCGGT TGATTCCGTT CGCGGCGCCG CCGAAGACCA CCAACTCCGC TGGGGTGGTC
GCACAGGCGG TTGCGTCGGT CAGCTGGCCG AATCCCAATG ATTGGTGGCT CGTGCGGTTG
CTGGGCTCGA TTACCCCCAC GGAAAGGACG ACGATCGTTC GTTTGCTCGG TCAGTCGTAC
TTGGCGACGG GCATGGCGCG GTTTCTTACC TCGATCGCAC AGCAGCTGAC CTTCGGCCCA
GGGGGCACAA CGGCTGGCTC CGGCGGAGCC TGGTACCCAA CGCCACAATT CGCCGGCCTG
GGTGCAGGCC CGGCGGTGTC GGCGAGTTTG GCGCGGGCGG AGCCGGTCGG GAGGTTGTCG
GTGCCGCCAA GTTGGGCCGT CGCGGCTCCG GCCTTCGCGG AGAAGCCTGA GGCGGGCACG
CCGATGTCCG TCATCGGCGA AGCGTCCAGC TGCGGTCAGG GAGGCCTGCT TCGAGGCATA
CCGCTGGCGA GAGCGGGGCG GCGTACGGGC GCCTTCGCTC ACCGATACGG GTTCCGCCAC
AGCGTGATTA CCCGGTCTCC GTCGGCGGGA TAG
 
Protein sequence
MDFGALPPEI NSGRMYCGPG SGPMLAAAAA WDGVAVELGL AATGYASVIA ELTGAPWVGA 
ASLSMVAAAT PYVAWLSQAA ARAEQAGMQA AAAAAAYEAA FVMTVPPPVI TANRVLVMTL
IATNFFGQNS AAIAVAEAQY AEMWAQDAVA MYGYAAASAS ASRLIPFAAP PKTTNSAGVV
AQAVASVSWP NPNDWWLVRL LGSITPTERT TIVRLLGQSY LATGMARFLT SIAQQLTFGP
GGTTAGSGGA WYPTPQFAGL GAGPAVSASL ARAEPVGRLS VPPSWAVAAP AFAEKPEAGT
PMSVIGEASS CGQGGLLRGI PLARAGRRTG AFAHRYGFRH SVITRSPSAG