| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11763 |
|---|
| Symbol | |
|---|
| ID | 5222443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1968080 |
|---|
| End bp | 1968691 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640606523 |
|---|
| Product | isopentenyl-diphosphate delta-isomerase |
|---|
| Protein accession | YP_001287706 |
|---|
| Protein GI | 148822952 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
|---|
| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 412 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 174 |
|---|
| Fosmid unclonability p-value | 0.00483885 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA GCTACCGGCC AGCTCCACCG ATCGAGCGGG TGGTTTTGCT CAACGACCGC
GGCGACGCGA CAGGTGTGGC CGACAAGGCC ACCGTGCACA CCGGCGACAC CCCTTTGCAC
CTCGCGTTCT CCAGCTATGT GTTCGATCTG CACGATCAGC TGTTGATCAC GCGGCGGGCC
GCCACCAAGA GGACGTGGCC GGCGGTATGG ACCAACAGTT GCTGCGGGCA CCCCCTGCCT
GGCGAATCGC TACCCGGCGC CATACGCCGG CGGCTCGCTG CCGAACTCGG ACTGACCCCA
GATCGGGTCG ATCTGATCCT GCCGGGGTTC CGCTACCGGG CCGCTATGGC CGATGGCACC
GTGGAAAACG AGATCTGCCC CGTCTACCGA GTCCAGGTTG ACCAACAGCC CCGGCCGAAC
TCGGACGAGG TCGACGCGAT CCGCTGGTTG TCCTGGGAAC AATTCGTGCG CGATGTTACC
GCCGGCGTAA TCGCCCCGGT ATCCCCTTGG TGCCGCTCAC AACTGGGCTA CCTGACCAAA
CTTGGACCAT GTCCGGCACA GTGGCCCGTG GCCGACGACT GCCGGCTACC GAAAGCCGCA
CATGGTAATT AA
|
|---|
| Protein sequence | MTRSYRPAPP IERVVLLNDR GDATGVADKA TVHTGDTPLH LAFSSYVFDL HDQLLITRRA
ATKRTWPAVW TNSCCGHPLP GESLPGAIRR RLAAELGLTP DRVDLILPGF RYRAAMADGT
VENEICPVYR VQVDQQPRPN SDEVDAIRWL SWEQFVRDVT AGVIAPVSPW CRSQLGYLTK
LGPCPAQWPV ADDCRLPKAA HGN
|
|---|
| |