Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11685 |
Symbol | |
ID | 5222365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 1888967 |
End bp | 1890742 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640606445 |
Product | macrolide ABC transporter ATP-binding protein |
Protein accession | YP_001287630 |
Protein GI | 148822876 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 318 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 204 |
Fosmid unclonability p-value | 0.819157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCACC TACTCGGAGC CGAGGCCGTG CACCTGGCCT ATCCGACTCA GGTGGTGTTC GAGGCAGTCA CGCTCGGGGT CAACGACGGG GCGCGCATCG GCATCGTCGG GCGAAACGGC GACGGCAAAT CCAGTCTGCT GGGCCTGCTC ACCGGTCAAC TGCGGCCGGA CTCCGGTCGG GTCACCCGGC GTAGCGGATT GCGGGTGAAC GCGCTCAGCC AAACAGACAC CCTCGACCCC AACCGCACCG TCGGCTGGAC GCTCATCGGT GACCAACCCG AACACCAATG GGCGGGCAAC CCGCGTATCC GGGACGTGGT CGCCGGCCTG GTATCCGACA TCGCCTGGGA CACCCCGGTC AGCACCCTCA GCGGTGGCCA GCGCCGACGG GTGCAACTGG CCAGCCTGCT GGTCGGCGAA TGGGACGTGA TCGCTCTCGA CGAGCCCACC AACCACCTCG ACATCCAAGG CATCACCTGG CTCGCCGACC ACCTACGGCG GCGCTGGGCC CGCAATACCG GCGGCCTACT CGTGGTCACC CACGACCGCT GGTTCCTCGA CGAGGTCGCC ACCACAACAT GGGAAGTGCA CGACGGAATC GTCGAACCTT TCGAAGGCGG CTACGCGGCG TACGTGCTGC AGCGCGTCGA GCGGGACCGG CTGACCGCCG CGGCCGAAGC CAAGCGGCAG AACCTGCTGC GCAAGGAGCT GGCTTGGTTG CGCCGCGGCG CACCGGCGCG GACCTGCAAG CCCAAGTTCC GGATCGAGGC CGCCAACCAA CTGATCGCAG ACGTGCCGCC ACCGCGCAAC ACCGTGGAGC TGGCCAAGCT GGCGGCCGCT CGGCTCGGAA AGGACGTCGT CGACCTGCTC GGCGTGTCGG TCTCGTACCA GCCTTCTGGG GGCCGCCCGG TGTTGCGCGA TATCGAATGG CGGATCGGCC CGGGTGAACG TATCGGCATC GTCGGGGCTA ACGGCGCCGG CAAGTCGACC CTGCTGGGCT TGATCGCCGG CACCGTCCAG CCCGGTGTCG GACGTGTCAA GCGCGGCAAG ACCGTCCGGC TGGCAGTGCT CGATCAGCAC GGGGACGATC TGGCACCGTT TGCCGACGAC CGGATCGCCG ATGTGCTAGG CAGGCTGCGT GGCGGCTATC AGGTCGAAGG CCGCGAGGTT ACCCCGACCC AGCTGCTAGA GCGTCTCGGG TTCCGCCGGG ACCAGCTGTC CGCGCGAGTC GACGACCTCT CCGGTGGTCA GCGTCGGCGG TTGCAGCTCA TGCTGACGCT GTTGTCCGAG CCGAACGTGC TGCTCCTCGA CGAGCCCACC AACGACGTGG ACACCGAGAT GCTGACGGCG ACCGAAGACC TGCTTGACTC GTGGGCGGGT ACGTTGATCG TCGTCTCACA CGACCGGTAT CTGCTCGAGC GGGTCACTGA CCAGCAGTAC GCGATTCTCG ATGACCGGTT GCGGCACCTG CCCGGCGGCA TCGACGAATA CCTGCAGCTG GCTGCCCGCG TTAGCGCCCC AGCACCGGCC GAGCGGCCAG CGCCGCCGGC GATGTCGGGC GCACAGCGAC GTGCCACCGA AAAAGAGTTG GCCGCAGTCG ACCGTCAACT CGCCCGCCTG GCCGACCGGG TGGCCGCCAA ACATACCGAA CTGGCCGAGC ATGACCAGTC CGACCACGTC GGCATCACCC GGCTGACCCA GCAACTACGT GTCCTGCAAG ACCACGTCGC GGCGATGGAG AATCGCTGGC TGGAGCTTTC GGAGATGCTC GAATGA
|
Protein sequence | MAHLLGAEAV HLAYPTQVVF EAVTLGVNDG ARIGIVGRNG DGKSSLLGLL TGQLRPDSGR VTRRSGLRVN ALSQTDTLDP NRTVGWTLIG DQPEHQWAGN PRIRDVVAGL VSDIAWDTPV STLSGGQRRR VQLASLLVGE WDVIALDEPT NHLDIQGITW LADHLRRRWA RNTGGLLVVT HDRWFLDEVA TTTWEVHDGI VEPFEGGYAA YVLQRVERDR LTAAAEAKRQ NLLRKELAWL RRGAPARTCK PKFRIEAANQ LIADVPPPRN TVELAKLAAA RLGKDVVDLL GVSVSYQPSG GRPVLRDIEW RIGPGERIGI VGANGAGKST LLGLIAGTVQ PGVGRVKRGK TVRLAVLDQH GDDLAPFADD RIADVLGRLR GGYQVEGREV TPTQLLERLG FRRDQLSARV DDLSGGQRRR LQLMLTLLSE PNVLLLDEPT NDVDTEMLTA TEDLLDSWAG TLIVVSHDRY LLERVTDQQY AILDDRLRHL PGGIDEYLQL AARVSAPAPA ERPAPPAMSG AQRRATEKEL AAVDRQLARL ADRVAAKHTE LAEHDQSDHV GITRLTQQLR VLQDHVAAME NRWLELSEML E
|
| |