Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11681 |
Symbol | |
ID | 5222361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1881902 |
End bp | 1883410 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640606441 |
Product | polyketide synthase pks17 |
Protein accession | YP_001287626 |
Protein GI | 148822872 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 224 |
Plasmid unclonability p-value | 0.00000530022 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 204 |
Fosmid unclonability p-value | 0.704924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGCCG GACCGCAGCG GATTGCGCAG ATGCTGGCCG AGTTAGTCGA GTTGTTCAAA ACTGAAGCGC TGCATCGGCT TCCAGTCAAG TCATGGGATG TGCGGCACGC TCGGGAGGCG TATCGGTTCT TGAGCCAGGC GCGCCATGTC GGCAAAGTGG TGCTGACCAT GCCGGACGCG TGGGCCGCGG GCACGGTGCT GATCACCGGT GGCACTGGGA TGGCAGGTTC TGCGGTGGCG CGTCATCTGG TGAGTCGATA CGGGGTGCGG CAGGTGGTGT TGGCCAGTCG TGCTGGTGAG CACACGGAGA GCGTCGCAGC ATTGGTGGAC GAGCTCGGCT CGGCCGGCGC CCGAGTGCAG GTGGTGTCTT GCGATGTGGC CGATCGTGAT GCGGTGGCGG GTTTGGTGGC AAGCCAACCA GATCTGACTG CAGTGTTTCA TGCGGCTGGG GTTCTTGACG ATGCGGTAAT CACCGGATTG ACGCCGGAGC GGGTGGATAA GGTATTGCGG GCCAAGGTCG ATGGGGCCTG GAATTTGCAT GAGCTCACCC GGCACCTGGA TGTGTCAGCG TTTGTGTTGT TTTCGTCGAT GGCCGGGATT GTGGGTGCGC CGGGCCAGGC CAATTATGCT GCAGCGAACG CGTTTTTGGA CGGGTTGGCG GCCTATCGGC GATCACGTGG ACTGGCCGCG TTGTCGGTGG CGTGGGGATT GTGGGAGCAG GCTTCGGCGA TGACCGAGCA TTTAGGCGAG CGGGATCGGG TCCGGATGAG TCGGGTTGGA CTGGCGCCGT TGCCTACCAA CCAGGCGATG GGATTCCTGG ATGCCGCGTT GCTGGCGGAT CGGCCCGTGG TGGTGGCTGC TCGGCTGGAT CGTGCCGCGC TGGCCGGTGC CGAGCTGCGG GCACTATTTA GCCAGTTGGT TGCCGGTCCG ATCCGACGGA TCATCGACGG CGCCGATGAG GTGTCGGGGT CGGGATTGGC GTCGCGGCTG CACGGGCTGA CTCCCGAGCA GCGGCACCGC GAACTCACCG AGTTAGTATG TAGCAACGCC GCGATCGTGT TGGGGCATTC CGGCACTGAG ATCGACGCGC ACAAGGCATT CCAGGATCTC GGGTTTGATT CGCTGACAGC GGTGGAGCTG CGCAACCGGC TCAAGACTGC GACCGGGTTG ACCTTGCCAC CGACCTTGAT CTTTGACTAC CCCACGGCCG CCGAGTTGGC CGAACACCTC GACATCCAGC TGGCGAACGC CCCTGCCGTC ACGGTCGACC AACCCAACCC GTCGACTCGT TTCAACGAGG TCACCCGCGA ACTACAAGCA TTGCTCGACC AACCCAACTG GAACCCCGAC GACAAAACGC GCCTGATCAA GCGATTGCAA GCGATTTTGA CCGATTGCAC CGCTCCACCG GCCAGCTCCG GCCCGTCTAC CACCCATGAC GACGAGGACA TCACCACCGC CACTGAAAGC CAGCTTTTTG CCATCCTCGA CGACGAACTT GGACCTTAG
|
Protein sequence | MEAGPQRIAQ MLAELVELFK TEALHRLPVK SWDVRHAREA YRFLSQARHV GKVVLTMPDA WAAGTVLITG GTGMAGSAVA RHLVSRYGVR QVVLASRAGE HTESVAALVD ELGSAGARVQ VVSCDVADRD AVAGLVASQP DLTAVFHAAG VLDDAVITGL TPERVDKVLR AKVDGAWNLH ELTRHLDVSA FVLFSSMAGI VGAPGQANYA AANAFLDGLA AYRRSRGLAA LSVAWGLWEQ ASAMTEHLGE RDRVRMSRVG LAPLPTNQAM GFLDAALLAD RPVVVAARLD RAALAGAELR ALFSQLVAGP IRRIIDGADE VSGSGLASRL HGLTPEQRHR ELTELVCSNA AIVLGHSGTE IDAHKAFQDL GFDSLTAVEL RNRLKTATGL TLPPTLIFDY PTAAELAEHL DIQLANAPAV TVDQPNPSTR FNEVTRELQA LLDQPNWNPD DKTRLIKRLQ AILTDCTAPP ASSGPSTTHD DEDITTATES QLFAILDDEL GP
|
| |