Gene TBFG_11679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11679 
Symbol 
ID5222359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1870694 
End bp1877074 
Gene Length6381 bp 
Protein Length2126 aa 
Translation table11 
GC content67% 
IMG OID640606439 
Productpolyketide synthase pks7 
Protein accessionYP_001287624 
Protein GI148822870 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases
[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00819043 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones191 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA CTCCCGAAGA CCTCGTCAAG GCCCTGCGCA GATCGCTCAA GCAAAACGAG 
CGACTGAAGC GAGAGAACCG GGATCTTCTT GCCCGGACCA CCGAGCCGGT GGCGGTGGTG
GGGATGGGAT GCCGCTATCC GGGTGGGGTG GATTCGCCGG AGACGCTGTG GGAGCTGGTG
GCACACGGCC GTGACGCGGT TTCGGAGTTC CCGGCGGATC GCGGCTGGGA TGTGGCGGGG
TTGTTTGACC CCGATCCCGA CGCGGTAGGC AAGTCGTATA CCCGGTGCGG CGGGTTCTTG
ACGGATGTCG CCGGTTTTGA CGCCGAGTTT TTCGGGATCG CACCCAGCGA GGCGCTTGCG
ATGGATCCCC AGCAGCGGTT GCTGTTGGAA GTGTCGTGGG AAGCGTTGGA GCGGGCGGGC
ATCGACCCAA TCACGTTGCG GGGTTCGCAG ACGGGCGTGT TCGCCGGGGT GTTCCACGGC
TCGTATGGGG GCCAAGGCCG GGTGCCGGGT GACCTGGAGC GCTACGGGCT GCGTGGCTCG
ACGCTGAGCG TGGCCTCCGG GCGGGTGGCG TATGTGTTGG GCCTGCAGGG CCCGGCGGTG
TCGGTGGATA CCGCGTGTTC GTCGTCGTTG GTGGCACTGC ATTTGGCGGT GCAGTCACTG
CGCCTCGGCG AATGCGACCT GGCGCTGGTC GGTGGGGTCA CCGTGATGGC CACCCCGGCG
ATGTTCATCG AGTTCAGCAG GCAGCGGGCG CTGTCCGCCG ATGGTCGTTG TAAGGCCTAT
GCGGGTGCCG CCGATGGGAC CGCGTTTGCC GAGGGCGCCG GGGTGCTCGT GCTGGCGCGG
TTGGCTGACG CGCGCCGGTT GGGGCATCCG GTGCTGGCGC TGGTGCGCGG ATCGGCGGTC
AATCAGGACG GCGCCTCCAA CGGGCTGGCC ACGCCGAATG GGCCGGCGCA GCAACGGGTG
ATCACTGCGG CGCTGGCCAG TGCGCGGTTA GGTGTCGCCG ACGTGGATGT GGTCGAGGGG
CACGGGACGG GCACCACGTT GGGGGATCCC ATTGAGGCGC AGGCGATTTT GGCGACGTAT
GGACAGCGGC CGGCCGATCG GCCGTTGTGG CTGGGGTCGA TCAAATCGAA CATCGGTCAT
ACGTCGGCGG CTGCGGGGGT CGCCGGGGTG ATCAAGATGG TGCAGGCGAT GCGCCACGGC
GTGCTGCCCA AGACGTTGCA CGTGGATGTG CCGACGCCGC ATGTGGATTG GTCGGCGGGG
GCGGTGTCGT TGTTGACCGA GCCGCGGCCG TGGCACGTGC CGGGCCGGCC GCGGCGGGCC
GGTGTGTCGT CGTTCGGGAT CAGCGGCACC AACGCACATG TGATTCTGGA AGAGGCACCG
GCAGTGGAAC CGGTTGGCGC GGCCCATGGC AACGACCCGG TGGCGGTGCC GTGGGTGCTG
TCGGCGAGGT CGGCGCAAGC GTTGACCAAC CAGGCGCGAC GGCTGTTGGC CTGGGTGGGC
GCCGATGAGA ACGTGCGCCC GCTCGATGTG GGGTGGTCGC TGGTCAACAC CCGGTCGCTG
TTTGATCATC GGGCCGTGGT CGTGGGCGCC GACCGCACTC AGCTGATGGA AGGGCTGACG
GGTCTGGCGG CCGGCGTGCC CGGCGCCGAC GTGGTGGCGG GCCGCGCCCA GACGGTGGGC
AAGACGGCAT TCGTGTTCCC GGGCCAGGGC GCGCAGTGGC TGGGCATGGG AGCCCAGTTA
TGTGCTACCG CACCGGTGTT CGCCGAACAT ATCCATCGCT GCGAACGGGC GCTGCGTGAG
CACGTGGAGT GGTCGCTGCT CGACGTGCTG CGCGGGGCAC CCGGCGCACC GGGGCTGGAT
CGGGTGGATG TGGTGCAGCC GGCGTTGTGG GCGGTGATGG TGTCGCTGGC CGAATTGTGG
CGGTCGGTGG GTGTGGTTCC CGACGCGGTC ATCGGGCATT CGCAGGGGGA GATCGCGGCG
GCATATGTGG CGGGCGCCCT GTCGCTTCGG GACGCGGCTG CGGTGGTGGC ACTGCGCAGC
CGGTTGCTGG TGCGGTTGGG CGGTGCCGGC GGCATGGTCT CGTTGGCCTG TGGCCAGCCG
CAGGCCGAGA AGTTGGCGTC CCAATGGGGA GACCGACTGA ATATCGCTGC AGTCAATGGT
GTCTCGTCGG TCGTGCTGGC CGGCGAGACG GATGCCGTGA CGGAGCTGAT GCAGCGATGT
GAGGCCGAAG GCATTCGTGC CCGCAGGATC GACGTCGACT ACGCGTCACA CTCGGCGCAG
GTGGACGCGA TCCGGGAGGA GCTCATCGCG GCGCTGCGAG GTATCGAACC CCGTACTTCC
ACGGTGGCGT TCTTCTCCAC TGTCACCGGC GAACTCATGG ATACCGCCGG TGTGAACGCC
GAGTACTGGT ACCGAAGCAT CCGCCAGCCG GTGCAGTTCG AACGCGCCGT CCGCAACGCC
TTCGACGGCG GATACCGGGT GTTCGTCGAA TCCAGCCCCC ATCCGGTCCT GATCGCCGGC
ATCGAAGAGA CGTTGGTCGA CTGTGATCGC GGCGCTACGG GTGAACCGAT TGTCATTCCG
ACGCTGGGTC GCGATGACGG CGGGGTGGGC CGGTTTTGGC TGTCGGCGGG GCAGGCCCAC
GTTGCGGGCG TGGGTGTTGA CTGGCGTGCC GCGTTTGCCG ACCTGGGAGG CCGCCGGGTG
GAGTTGCCGA CGTACGCGTT TGCGCGCCAG CGGTTCTGGC TAGACGGCCT AGGTGCTGTT
GGCGGCGATC TGGGTGGTGT CGGCTTGGTG GGCGCCGAGC ATGGATTGTT GGCTGCAGTG
GTGCAACGGC CCGACTCGGG TGGGGTGGTG TTGACGGGCC GGATATCGGT GGTCGCTGCG
CCGTGGCTGG CCGATCATGC GGTGGGCCCG GTGGTGCTGT TCCCGGGCAC GGGGTTTGTT
GAGTTGGCCT TGCGGGCCGG TGACGAGGTG GGTTGTTCGG TGCTGCAGGA GTTGACGTTG
CAGGCACCGT TGGTGCTGCC GGCAGATGGG GTGCGGGTCC AGGTGGTGGT GGGCGGCGTC
GAGCAGTCGG GTACTCGGAA TGTGTGGGTG TATTCGGCTG CCGGCCAGGC GGATTCGAGT
CCGGGATGGA CGTTGCACGC GCAGGGCGTG TTGGGGGTTG GCTCGGTGCA GCCGGCCGCG
GAGCTGTCGG TGTGGCCGCC GGTTGGGGCA CGGGCGATGG ACGTCGCCGA CGGGTATCAG
GTGTTGGCGG CGCGGGGGTA TGGGTATGGG CCGGCGTTTC GGGGTTTGCA GGCCTTGTGG
CGGCGGGGGG CCGAGGTGTT CGCCGACGTC ACTCTCCCTG AGGGTGTGCC GATACGGGGG
TTTGGGATTC ATCCGGCGGT GTTGGATGCG GCGTTGCATG CGTGGGGAAT TGTCGAGGGT
GAGCAGCAGA CGATGTTGCC GTTCTCGTGG CAGGGGGTGT GTTTGCACGC AAGCGGGGCT
GCGCGGGTCC GTGTGCGACT GGCGCCGGTG GGCCGGGGGG CGGTGTCGGT GGAGTTGGCC
GATCCGCAGG GGTTGCCGGT GTTGTCGGTG CGGCAGTTGA TGGTTCGTCC GGTCTCAGCG
GCCGCGTTGT CGAGGTCGAC CGCCGGCGAC CGGGGATTGC TGGAGATGAT CTGGACACCG
GTGCCGTTGG AGGGCGGCGA CATTGGCGAC GACGCCGTGG TGTGGGAGCT GCCGCCTCAC
GCCGGCGCGC AGGCCGGCGG GGATGTGCTG GCAGCGGTGT ACCGGGGTGT GCACGAGGTG
TTGGAGGTGT TGCAGTCGTG GTTGGCTAGC GATGCGACCG GTCTGGGTGT GGTGGTGACG
CGTGGGGCGG TGGGTCCGGT TGATGACGAT GTCACCGATT TGGCGGGTGC TGCGGTGTGG
GGGTTGGTGC GCTCTGCCCA GGCTGAACAT CCGGGCCGGG TGGTGTTGGT GGATACCGAT
GGGTCGGTCG CTGTCGAGGA TGCGGTTGGT TTCGGCGCAC GCTCGGGTGA GCCGCAGCTG
GTGGTTCGTC GAGGCCGGGT ATATGCGGCA CGGTTGGCCC CGGTAGCGGC CGGGTTGACT
TTGCCTTCGG CGTCGGCTGG GGGCTGGCGG TTGGTTGCCG GTGGTGGGGG GACTTTGGCG
GATGTGGTGG TGGCGCCCGT TGCTCCGGTG GAGCTGGCGA CGGGGCAGGT GCGGGTGGCC
GTGGGTGCGG TGGGGGTCAA TTTCCGGGAT GTGTTGGTGG CGTTGGGGAT GTATCCCGGC
GGCGGGGAAC TGGGTGTCGA CGGGGCAGGG GTGGTCGTTG AAGTCGGCCC GGGGGTAACC
GGTTTGGCCG TTGGTGACCG GGTGATGGGG TTATTGGGGC TGGTGGGTTC GGAGGCGGTG
GTGGATGCGC GGTTGGTAAC CATGGTGCCG GCGGGCTGGT CGTTGGTGGA GGCAGCGGCC
GTGCCGGTGG CGTTTCTGAC GGCGTTTTAC GGGCTGTCGG TGTTGGCGGA GGTCGCGGCG
GGGCAGAAGG TGTTGGTGCA TGCCGGCACC GGCGGGGTTG GTATGGCAGC GGTGTCGTTG
GCGCGGTATT GGGGTGCAGA GGTTTTCGTC ACGGCGAGTC GCGCCAAGTG GGATACATTG
CGGGCGATGG GTTTTGACGA TATCCATATC TCCGACTCGC GATCGTTGGA GTTCGAGGAG
GCGTTTCTGC GGGCCACCGA GGGCAGCGGT GTGGACGTAG TGCTGAACTC GCTCGCCGGT
GAGTTCACCG ATGCCTCGCT GCGGCTACTG CCCAGCGGTG GCCGCTTTAT CGAGCTGGGT
AAAACCGATA TTCGCGACGG GCAGACGGTG GCCGAGCGGC ATCGGGGGGT GCGGTATCGG
GCGTTCGATT TGGTCGAAGC CGGCCCAGAC CGCATTGCGG CGATGCTTTC CGAGGTAGTG
GGGTTGCTAG CGGCCGGAGT GTTGGCGCGG TTGCCGGTCA AGACTTTTGA TGCGCGATGC
GCCCCGGCGG CCTACCGGTT TGTCAGTCAG GCCCGTCATA TCGGCAAGGT CGTGTTGACC
ATCCCCGATG GTCCGGGTGG GCAGTCCGGG TTGGCGGGGG GCACCGTGGT GGTCACTGGG
GGGACCGGCA TGGCCGGTTC GGCGGTGGCT ACCCATTTGG TCCGGCGACA TGGGGTGGCC
AATCTGGTTC TGGTCAGCCG AAGCGGTGAG CAGGCCGACA GGGCGGCAGA AGTCGCGGCC
CTGTTGCGCG AGGGCGGGGC CCAGGTGGCG GTGGTCTCCT GTGATGTGGC TGATCGTGAT
GCGCTGGCGG CATTGTTGGC GGGTCTGGAT CCGCGCTATC CGCTTAAAGG GGTGTTTCAT
GCCGCTGGGG TGTTGGACGA TGCCGTGATC ACGGGCTTGA CACCGGATCG GGTGGATACG
GTGTTGCGGG CCAAGGTCGA TGGGGCCTGG AATCTGCACG AGCTAACCGA GGACATGGAT
TTGTCGGCGT TTGTGGTGTT TTCGTCGATG GCCGGGATTG TGGGCACACC GGCTCAGGGG
AATTATGCTG CGGCGAATGC GTTTTTGGAC GGGTTGGTGG CCTATCGGCG CTCGCGTGGG
CTGGCCGGAT TGTCGGTGGC GTGGGGACTG TGGGAGCAGG CCTCGGCGAT GACCCGGCAC
CTCGGCGAGC GGGATCGCGC CAGGATGACG CAGGCCGGGC TCGCTCCGCT AACCACCGAG
CAGGCGCTAG GGTTCCTGGA CACTGCGCTG CAGGCCGATC GCGCGGTGGT AGTGGCGGCC
CGGCTGGATC GTGCCGCGCT GGCCGGCGCT GGTGCTGCGC TACCGGCATT ATTCAGCCAG
TTGGCTGCCG GTCCGACCCG GCGGAGGATC GACGCCGCCG ATACGGCGGT GTCGATGTCG
GGCTTAGTCA GCCGGCTGCA TGCGCTCACG CCCGAGCGGC GGCAGCGCGA ACTCACCGAT
TTGGTGATCA GCAATGCCGC GGCGGTGTTG GGTCGTTCCA GCAGTGTCGA TATCAACGCT
CACAAAGCAT TCCAAGATCT CGGGTTCGAT TCCTTGACCG CCGTGGAGCT GCGCAACCGA
CTCAAGACCG CCACCGGGCT CACGTTGTCG CCCACGCTGA TCTTCGACTA CCCCACGCCG
GCCACGCTGG CCGAACACCT CGACAGCCGG CTAGTCACCG CCAGCGGTAG CGATCAACAA
AGCCTGTCAG ACCGTGTTGA CGACATCACC CGCGAGCTAG TTGTGCTGCT TGACCAACCC
GACTTGAGCG CCAACGTCAA AGCGCACCTG CGCACCCGCC TGCAAACCAT GTTGACCAGC
CTGACCACTG AAGACGACGA CATCGCCGCC GCGACCGAAA GCCAGCTTTT CGCCATCCTC
GACGAGGAAC TCGGCTCCTA A
 
Protein sequence
MNSTPEDLVK ALRRSLKQNE RLKRENRDLL ARTTEPVAVV GMGCRYPGGV DSPETLWELV 
AHGRDAVSEF PADRGWDVAG LFDPDPDAVG KSYTRCGGFL TDVAGFDAEF FGIAPSEALA
MDPQQRLLLE VSWEALERAG IDPITLRGSQ TGVFAGVFHG SYGGQGRVPG DLERYGLRGS
TLSVASGRVA YVLGLQGPAV SVDTACSSSL VALHLAVQSL RLGECDLALV GGVTVMATPA
MFIEFSRQRA LSADGRCKAY AGAADGTAFA EGAGVLVLAR LADARRLGHP VLALVRGSAV
NQDGASNGLA TPNGPAQQRV ITAALASARL GVADVDVVEG HGTGTTLGDP IEAQAILATY
GQRPADRPLW LGSIKSNIGH TSAAAGVAGV IKMVQAMRHG VLPKTLHVDV PTPHVDWSAG
AVSLLTEPRP WHVPGRPRRA GVSSFGISGT NAHVILEEAP AVEPVGAAHG NDPVAVPWVL
SARSAQALTN QARRLLAWVG ADENVRPLDV GWSLVNTRSL FDHRAVVVGA DRTQLMEGLT
GLAAGVPGAD VVAGRAQTVG KTAFVFPGQG AQWLGMGAQL CATAPVFAEH IHRCERALRE
HVEWSLLDVL RGAPGAPGLD RVDVVQPALW AVMVSLAELW RSVGVVPDAV IGHSQGEIAA
AYVAGALSLR DAAAVVALRS RLLVRLGGAG GMVSLACGQP QAEKLASQWG DRLNIAAVNG
VSSVVLAGET DAVTELMQRC EAEGIRARRI DVDYASHSAQ VDAIREELIA ALRGIEPRTS
TVAFFSTVTG ELMDTAGVNA EYWYRSIRQP VQFERAVRNA FDGGYRVFVE SSPHPVLIAG
IEETLVDCDR GATGEPIVIP TLGRDDGGVG RFWLSAGQAH VAGVGVDWRA AFADLGGRRV
ELPTYAFARQ RFWLDGLGAV GGDLGGVGLV GAEHGLLAAV VQRPDSGGVV LTGRISVVAA
PWLADHAVGP VVLFPGTGFV ELALRAGDEV GCSVLQELTL QAPLVLPADG VRVQVVVGGV
EQSGTRNVWV YSAAGQADSS PGWTLHAQGV LGVGSVQPAA ELSVWPPVGA RAMDVADGYQ
VLAARGYGYG PAFRGLQALW RRGAEVFADV TLPEGVPIRG FGIHPAVLDA ALHAWGIVEG
EQQTMLPFSW QGVCLHASGA ARVRVRLAPV GRGAVSVELA DPQGLPVLSV RQLMVRPVSA
AALSRSTAGD RGLLEMIWTP VPLEGGDIGD DAVVWELPPH AGAQAGGDVL AAVYRGVHEV
LEVLQSWLAS DATGLGVVVT RGAVGPVDDD VTDLAGAAVW GLVRSAQAEH PGRVVLVDTD
GSVAVEDAVG FGARSGEPQL VVRRGRVYAA RLAPVAAGLT LPSASAGGWR LVAGGGGTLA
DVVVAPVAPV ELATGQVRVA VGAVGVNFRD VLVALGMYPG GGELGVDGAG VVVEVGPGVT
GLAVGDRVMG LLGLVGSEAV VDARLVTMVP AGWSLVEAAA VPVAFLTAFY GLSVLAEVAA
GQKVLVHAGT GGVGMAAVSL ARYWGAEVFV TASRAKWDTL RAMGFDDIHI SDSRSLEFEE
AFLRATEGSG VDVVLNSLAG EFTDASLRLL PSGGRFIELG KTDIRDGQTV AERHRGVRYR
AFDLVEAGPD RIAAMLSEVV GLLAAGVLAR LPVKTFDARC APAAYRFVSQ ARHIGKVVLT
IPDGPGGQSG LAGGTVVVTG GTGMAGSAVA THLVRRHGVA NLVLVSRSGE QADRAAEVAA
LLREGGAQVA VVSCDVADRD ALAALLAGLD PRYPLKGVFH AAGVLDDAVI TGLTPDRVDT
VLRAKVDGAW NLHELTEDMD LSAFVVFSSM AGIVGTPAQG NYAAANAFLD GLVAYRRSRG
LAGLSVAWGL WEQASAMTRH LGERDRARMT QAGLAPLTTE QALGFLDTAL QADRAVVVAA
RLDRAALAGA GAALPALFSQ LAAGPTRRRI DAADTAVSMS GLVSRLHALT PERRQRELTD
LVISNAAAVL GRSSSVDINA HKAFQDLGFD SLTAVELRNR LKTATGLTLS PTLIFDYPTP
ATLAEHLDSR LVTASGSDQQ SLSDRVDDIT RELVVLLDQP DLSANVKAHL RTRLQTMLTS
LTTEDDDIAA ATESQLFAIL DEELGS