Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11572 |
Symbol | lspA |
ID | 5222252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1746815 |
End bp | 1747489 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640606331 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001287517 |
Protein GI | 148822762 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 383 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 227 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTTGCT CCCATCCGGC CGCGGGGTCT GGGCGGGCCA TATCGGCCCT AGGGGATGAT GATGGTGTGC CTGACGAACC AACAGGATCG GCTGATCCGC TGACCTCGAC CGAGGAAGCC GGGGGGGCGG GGGAACCTAA CGCTCCCGCG CCGCCGCGAC GGCTGCGCAT GCTGCTGTCG GTCGCTGTGG TGGTGCTCAC ACTCGACATT GTCACCAAGG TGGTAGCTGT CCAACTGTTG CCGCCCGGCC AGCCGGTGTC GATTATCGGC GACACGGTGA CCTGGACTCT GGTGCGTAAT TCTGGGGCGG CCTTCTCGAT GGCGACCGGA TACACCTGGG TTTTGACGCT GATTGCGACG GGTGTCGTGG TCGGAATTTT CTGGATGGGG CGGCGGCTGG TATCGCCGTG GTGGGCGCTG GGTCTTGGGA TGATCCTGGG CGGTGCCATG GGCAACCTGG TTGATCGCTT CTTTCGGGCA CCGGGGCCGC TGCGCGGGCA CGTCGTCGAT TTCTTGTCGG TCGGCTGGTG GCCGGTGTTC AATGTCGCCG ATCCGTCGGT AGTCGGTGGC GCCATCCTGC TGGTCATCCT GTCGATCTTT GGCTTTGACT TCGACACCGT AGGTCGGCGA CACGCCGACG GGGACACCGT AGGTCGGCGC AAAGCCGATG GCTGA
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Protein sequence | MVCSHPAAGS GRAISALGDD DGVPDEPTGS ADPLTSTEEA GGAGEPNAPA PPRRLRMLLS VAVVVLTLDI VTKVVAVQLL PPGQPVSIIG DTVTWTLVRN SGAAFSMATG YTWVLTLIAT GVVVGIFWMG RRLVSPWWAL GLGMILGGAM GNLVDRFFRA PGPLRGHVVD FLSVGWWPVF NVADPSVVGG AILLVILSIF GFDFDTVGRR HADGDTVGRR KADG
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