| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11469 |
|---|
| Symbol | |
|---|
| ID | 5222148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | - |
|---|
| Start bp | 1622571 |
|---|
| End bp | 1624046 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640606228 |
|---|
| Product | PE-PGRS family protein |
|---|
| Protein accession | YP_001287414 |
|---|
| Protein GI | 148822660 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 272 |
|---|
| Plasmid unclonability p-value | 0.0503304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 212 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACG TGATGGTAGT CCCGGGAATG TTGTCAGCGG CGGCAGCGGA TGTGGCGAGC
ATCGGTGCGG CGCTTAGCGC GGCCAACGGA GCCGCGGCAC CCACGACGGC TGGTGTCCTG
GCCGCCGGGG CCGATGAGGT GTCGGCGGCC ATCGCGTCGT TGTTTTCTGG CTACGCCCGC
GACTATCAGG CGCTCAGTGC CCAAATGGCC AGATTTCATC AACAGTTCGT GCAGGCCTTA
ACCGCGAGCG TGGGCTCGTA TGCCGCCGCC GAGGCCGCCA ACGCCTCCCC CTTGCAGGCC
CTCGAACAAC AGGTGCTCGC GGCCATCAAC GCGCCCACCC AGACACTGCT GGGGCGTCCG
CTGATCGGCA ACGGCGCCGA CGGGCTGCCC GGTCAAAACG GTGGGGCCGG CGGGTTGCTG
TGGGGCAACG GCGGGAACGG CGGAGCCGGC GACGCCGCCC ACCCCAACGG CGGCAACGGC
GGGGATGCCG GAATGTTCGG TAACGGCGGG GCCGGCGGTG CCGGTTACAG CCCGGCGGCC
GGAACCGGCG CGGCCGGTGG AGCCGGCGGC GCCGGTGGAG CCGGTGGCTG GCTAAGCGGC
AACGGCGGCG CCGGCGGCAA CGGCGGTACT GGCGCCAGCG GCGCCGACGG CGGCGGCGGC
CTCCCCCCCG TCCCCGCCAG CCCTGGCGGT AACGGCGGTG GCGGTGATGC CGGTGGTGCT
GCTGGGATGT TCGGCACCGG CGGCGCCGGT GGGACCGGCG GGGACGGCGG CGCCGGCGGT
GCCGGCGACA GTCCTAACAG CGGTGCCAAC GGCGCCCGTG GCGGCGACGG CGGCAACGGC
GCTGCGGGTG GGGCTGGTGG CCGGCTGTTC GGCAATGGCG GCGCCGGCGG CAACGGCGGC
ACCGCTGGCC AAGGTGGCGA CGGCGGCACG GCGCTAGGCG CTGGCGGCAT CGGCGGCGAC
GGCGGCACCG GCGGCGCCGG TGGTACTGGC GGCACAGCTG GCATCGGCGG CAGCAGCGCC
GGCGCCGGCG GCGCCGGCGG CGACGGCGGC GCCGGCGGCA CCGGCGGCGG CAGCTCAATG
ATCGGCGGCA AAGGCGGTAC CGGCGGCAAC GGCGGCGTCG GTGGCACCGG CGGCGCCAGC
GCATTGACCA TCGGCAATGG CAGCAGCGCC GGCGCCGGCG GCGCTGGCGG CGCAGGCGGC
ACCGGCGGCA CCGGCGGCTA TATCGAAAGC CTCGACGGCA AAGGCCAAGC CGGCAACGGC
GGCAACGGCG GCAACGGCGC CGCGGGTGGG GCAGGCGGAG GCGGCACCGG CGCCGGCGGT
AACGGCGGCG CCGGCGGCAA CGGCGGTGAC GGCGGGCCCA GCCAAGGTGG CGGCAATCCC
GGCTTTGGCG GCGACGGCGG CACCGGCGGA CCTGGCGGCG TCGGTGTGCC CGACGGGATC
GGCGGCGCCA ATGGCGCGCA AGGAAAGCAC GGGTGA
|
|---|
| Protein sequence | MSNVMVVPGM LSAAAADVAS IGAALSAANG AAAPTTAGVL AAGADEVSAA IASLFSGYAR
DYQALSAQMA RFHQQFVQAL TASVGSYAAA EAANASPLQA LEQQVLAAIN APTQTLLGRP
LIGNGADGLP GQNGGAGGLL WGNGGNGGAG DAAHPNGGNG GDAGMFGNGG AGGAGYSPAA
GTGAAGGAGG AGGAGGWLSG NGGAGGNGGT GASGADGGGG LPPVPASPGG NGGGGDAGGA
AGMFGTGGAG GTGGDGGAGG AGDSPNSGAN GARGGDGGNG AAGGAGGRLF GNGGAGGNGG
TAGQGGDGGT ALGAGGIGGD GGTGGAGGTG GTAGIGGSSA GAGGAGGDGG AGGTGGGSSM
IGGKGGTGGN GGVGGTGGAS ALTIGNGSSA GAGGAGGAGG TGGTGGYIES LDGKGQAGNG
GNGGNGAAGG AGGGGTGAGG NGGAGGNGGD GGPSQGGGNP GFGGDGGTGG PGGVGVPDGI
GGANGAQGKH G
|
|---|
| |