| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11460 |
|---|
| Symbol | |
|---|
| ID | 5222139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 1612424 |
|---|
| End bp | 1614193 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640606219 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001287405 |
|---|
| Protein GI | 148822651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 341 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 187 |
|---|
| Fosmid unclonability p-value | 0.111824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTC TGAAGCCCGA TCTTCCCGAC GTCGATCACG ACACCTGGTT GACCCAGCCA
CGCCGGACAC GATTGCAGGT CGTGACACGG GACTGGGTAG AACACGGTTT CGGAACGCCG
TATGCGGTGT ACCTGCTCTA TCTGACCAAG ATTGCGGTGT ACGTCGCCGC CGGCGCCGCG
ATCATCTCGC TGAACCCCGG ACTGGGCGGG CTGAGCCGCA TAGGCGACTG GTGGACACAG
CCGATCGTGT ACCAGAAGGT CATCGTCTTC ACGTTGCTGT TCGAGGTTTT GGGTTTTGGC
TGCGGATCCG GCCCGCTGAC CGGGCGGTTT TGGCCACCCA TCGGGGGCTT CCTTTATTGG
TTGCGGCCCA ACACAATTCG GCTGCCTGCT TGGCCGGATA AGGTCCCGTT CACCCAAGGC
GACACCCGCA CCGTCGTCGA CGTCGCCTTG TATGCCATCG TGTTGATCGG CGGGGTGTGG
GCGCTGTTGT CACCCGGCTC GCCAGGTCCG GGGGGAACGC CGGTCACCGC CGCCGGCGAC
GTCGGCCTGA TCAACCCGGT GCTGGTAGTG CCGACGATCG TCGCCCTGGG CGTCTTGGGG
CTGCGTGACA AGACGATCTT TCTTGCCGCC CGCGGCGAAC ACTACTGGCT GAAGCTATTC
GTGTTCTTTT TTCCCTTCAC CGACCAGATC GCGGCGTTCA AGATCATCAT GCTGTGCTTG
TGGTGGGGGG CGGCGACTTC CAAACTCAAC CACCATTTCC CCTACGTCGT CGCGGTGATG
ACCAGCAACA ACGCCCTGTT GCGCAGCAGA GTGTTCAACC CGATCAAGCA CCTGCTTTAC
CGCGACCACG CCAACGATCT GCGGCCCTCC TGGCTACCGA AACTCATGGC CCACGGGGGT
GGCACCACGG CGGAATTCCT GGTGCCCGGG ATTCTGGTGC TCGTCGCCGA CGGTCACCCA
TGGCGGTGGT TCCTCATCGG GTTCATGGTG CTCTTTCACC TCAACATCCT GTCCAACCTC
CCGATGGGGG TCCCGTTGGA GTGGAACGTG TTCTTCATCT TCTCGCTGTG CTATCTATTC
GGCCACTACG GCGCGATCAC TGCCACCGAC CTTCGGTCGC CGTTGCTGCT GGCGATCGTG
ATCGCGGTGG TTGCCGTGGT GATCATGGGA AACCTGTTGC CCGAAAAGAT TTCGTTTCTG
CCCGCCATGC GCTACTACGC CGGCAACTGG GCCACCAGCA TCTGGTGCTT CCGAGGTGAT
GCGGAAGCCA CCATGGAAAC CAGCGTCGTG AAAAGCTCTG CGCTGGTGGT CAATCAGCTG
GCCAAGCTCT ACGACGGGGC CACGGCCGAA ATCATGACCG ACAAGGTCGC CGCATTCCGG
GCCATGCACA CCCACGGCAG GGCGCTCAAC GGCCTGCTGC CCCGCGCTCT CGATGACGAA
GCTCACTACC GCATCCGCGA GGGCGAAATC GTGGCCGGGC CACTGGTCGG GTGGAATTTC
GGCGAGGGCC ATCTGCACAA CGAGCAGCTG GTGGCCGCCG TGCAGCGGCG GTGCAACTTC
GCCGACGGCG ATCTGCGGGT GATCATTCTC GAAGGTCAGC CCATCCACGT TCAGAAGCAG
TGGTATCGCA TTGTCGACGC CAAGACCGGT TTGTTCGAGG CCGGTTACGT CACGGTCGAG
GACATGTTGA GCCGCCAGCC ATGGCCCGAG CCCGGTGACG AGTTCCCGGT TCACGTCACG
ACGCAACGCG GCACGCCGTC AAAGCCATGA
|
|---|
| Protein sequence | MGFLKPDLPD VDHDTWLTQP RRTRLQVVTR DWVEHGFGTP YAVYLLYLTK IAVYVAAGAA
IISLNPGLGG LSRIGDWWTQ PIVYQKVIVF TLLFEVLGFG CGSGPLTGRF WPPIGGFLYW
LRPNTIRLPA WPDKVPFTQG DTRTVVDVAL YAIVLIGGVW ALLSPGSPGP GGTPVTAAGD
VGLINPVLVV PTIVALGVLG LRDKTIFLAA RGEHYWLKLF VFFFPFTDQI AAFKIIMLCL
WWGAATSKLN HHFPYVVAVM TSNNALLRSR VFNPIKHLLY RDHANDLRPS WLPKLMAHGG
GTTAEFLVPG ILVLVADGHP WRWFLIGFMV LFHLNILSNL PMGVPLEWNV FFIFSLCYLF
GHYGAITATD LRSPLLLAIV IAVVAVVIMG NLLPEKISFL PAMRYYAGNW ATSIWCFRGD
AEATMETSVV KSSALVVNQL AKLYDGATAE IMTDKVAAFR AMHTHGRALN GLLPRALDDE
AHYRIREGEI VAGPLVGWNF GEGHLHNEQL VAAVQRRCNF ADGDLRVIIL EGQPIHVQKQ
WYRIVDAKTG LFEAGYVTVE DMLSRQPWPE PGDEFPVHVT TQRGTPSKP
|
|---|
| |