Gene TBFG_11436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11436 
Symbol 
ID5222115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp1587442 
End bp1588815 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content71% 
IMG OID640606195 
Productfmu protein (sun protein) 
Protein accessionYP_001287381 
Protein GI148822627 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones279 
Plasmid unclonability p-value0.0300699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones196 
Fosmid unclonability p-value0.282741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTA GATCGCGTGG GCCGCGCCGC CGGCCGCTGG ACCCGGCGCG TCGTGCGGCC 
TTCGAGACGC TGCGGGCGGT TAGTGCGCGC GACGCCTACG CGAACCTGGT GTTGCCCGCG
CTGCTGGCCC AACGCGGTAT CGGCGGTCGC GACGCCGCGT TCGCCACCGA GCTGACATAC
GGCACCTGCC GAGCCCGCGG CCTGCTCGAC GCGGTCATCG GTGCGGCCGC CGAGCGTTCG
CCGCAGGCGA TCGATCCGGT GCTGCTAGAC CTGTTGCGGC TCGGCACCTA CCAATTGCTG
CGCACGCGGG TCGACGCACA CGCCGCAGTG TCGACCACCG TCGAGCAGGC CGGAATCGAA
TTCGATTCGG CGCGAGCAGG TTTCGTCAAC GGTGTACTAC GAACGATCGC CGGCCGAGAC
GAGCGGTCCT GGGTTGGCGA ACTCGCTCCT GATGCGCAGA ACGATCCGAT CGGGCATGCC
GCGTTCGTGC ATGCGCATCC CCGATGGATC GCCCAGGCCT TTGCTGACGC GTTGGGCGCG
GCGGTCGGGG AGCTCGAGGC AGTTTTGGCC AGCGACGACG AACGGCCAGC GGTGCACCTG
GCGGCACGCC CCGGGGTGCT GACCGCCGGC GAACTGGCCC GCGCGGTGCG CGGAACCGTC
GGTCGGTATT CGCCGTTTGC GGTGTATCTG CCGCGCGGTG ACCCGGGGCG ACTGGCGCCG
GTGCGCGACG GCCAAGCGCT GGTCCAGGAC GAGGGCAGCC AGTTAGTCGC CCGAGCATTG
ACCCTGGCGC CAGTCGACGG CGATACCGGA CGGTGGCTGG ACCTGTGTGC CGGACCGGGC
GGCAAGACCG CGCTGTTGGC CGGGCTGGGT TTGCAGTGCG CAGCCCGGGT GACCGCGGTG
GAACCCTCGC CACACCGCGC GGACCTGGTA GCACAGAACA CCCGCGGGCT GCCGGTTGAG
CTCTTGCGTG TCGACGGGCG GCACACCGAC CTCGACCCGG GTTTCGACCG GGTGCTGGTG
GATGCGCCCT GCACCGGGCT GGGCGCGTTA CGCCGTCGGC CGGAGGCCCG TTGGCGTCGT
CAGCCGGCGG ACGTAGCGGC ACTGGCCAAG CTACAACGCG AGTTGTTGAG CGCCGCCATC
GCGCTGACTC GGCCCGGCGG TGTCGTGCTC TATGCCACAT GCTCGCCGCA CCTGGCCGAG
ACTGTGGGTG CTGTCGCCGA CGCGCTACGC CGACATCCGG TTCACGCGCT CGATACCCGC
CCACTGTTCG AGCCGGTGAT CGCGGGGCTG GGGGAGGGGC CCCACGTTCA GCTGTGGCCG
CACCGGCACG GTACCGACGC CATGTTCGCC GCGGCGTTGC GCCGCCTGAC GTGA
 
Protein sequence
MTPRSRGPRR RPLDPARRAA FETLRAVSAR DAYANLVLPA LLAQRGIGGR DAAFATELTY 
GTCRARGLLD AVIGAAAERS PQAIDPVLLD LLRLGTYQLL RTRVDAHAAV STTVEQAGIE
FDSARAGFVN GVLRTIAGRD ERSWVGELAP DAQNDPIGHA AFVHAHPRWI AQAFADALGA
AVGELEAVLA SDDERPAVHL AARPGVLTAG ELARAVRGTV GRYSPFAVYL PRGDPGRLAP
VRDGQALVQD EGSQLVARAL TLAPVDGDTG RWLDLCAGPG GKTALLAGLG LQCAARVTAV
EPSPHRADLV AQNTRGLPVE LLRVDGRHTD LDPGFDRVLV DAPCTGLGAL RRRPEARWRR
QPADVAALAK LQRELLSAAI ALTRPGGVVL YATCSPHLAE TVGAVADALR RHPVHALDTR
PLFEPVIAGL GEGPHVQLWP HRHGTDAMFA AALRRLT