Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11416 |
Symbol | |
ID | 5222095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 1566110 |
End bp | 1567729 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640606175 |
Product | PPE family protein |
Protein accession | YP_001287361 |
Protein GI | 148822607 |
COG category | [N] Cell motility |
COG ID | [COG5651] PPE-repeat proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 190 |
Plasmid unclonability p-value | 0.0000000000793928 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 188 |
Fosmid unclonability p-value | 0.128386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CGTGGATAGC CTTCCCTCCC GAGGTGCACT CGGCGATGCT GAACTACGGT GCGGGCGTTG GGCCGATGTT GATCTCCGCC ACGCAGAATG GGGAGCTCAG CGCCCAATAC GCAGAAGCGG CATCAGAGGT CGAGGAATTG TTGGGGGTGG TGGCCTCCGA GGGATGGCAG GGGCAAGCCG CCGAGGCGTT TGTCGCCGCG TACATGCCGT TTCTGGCGTG GCTGATCCAA GCCAGCGCCG ACTGCGTGGA AATGGCCGCC CAGCAACACG TCGTCATCGA GGCCTACACT GCCGCGGTAG AGCTGATGCC TACTCAGGTC GAACTGGCCG CCAACCAAAT CAAGCTCGCG GTGTTGGTAG CGACCAATTT CTTTGGCATC AACACCATTC CCATTGCGAT CAATGAGGCC GAGTACGTGG AGATGTGGGT TCGGGCCGCC ACCACGATGG CGACCTATTC AACAGTCTCC AGATCGGCGC TCTCCGCGAT GCCGCACACC AGCCCCCCGC CGCTGATCCT GAAATCCGAT GAACTGCTCC CCGACACCGG GGAGGACTCC GATGAAGACG GCCACAACCA TGGCGGTCAC AGTCATGGCG GTCACGCCAG GATGATCGAT AACTTCTTTG CCGAAATCCT GCGTGGCGTC AGCGCGGGCC GCATTGTTTG GGACCCCGTC AACGGCACCC TCAACGGACT CGACTACGAC GATTACGTCT ACCCCGGTCA CGCGATCTGG TGGCTGGCTC GAGGCCTCGA GTTTTTTCAG GATGGTGAAC AATTTGGCGA ACTGTTGTTC ACCAATCCGA CTGGGGCTTT TCAGTTCCTC CTCTACGTCG TTGTGGTGGA TTTGCCGACG CACATAGCCC AGATCGCTAC CTGGCTGGGC CAGTACCCGC AGTTGCTGTC GGCTGCCCTC ACTGGCGTCA TCGCCCACCT GGGAGCAATA ACTGGTTTGG CGGGCCTATC CGGCCTGAGC GCCATTCCGT CTGCTGCGAT ACCCGCCGTT GTACCGGAGC TGACACCCGT CGCGGCCGCG CCGCCTATGT TGGCGGTCGC CGGGGTGGGC CCTGCAGTCG CCGCGCCGGG CATGCTCCCC GCCTCAGCAC CCGCACCGGC GGCAGCGGCC GGCGCCACCG CAGCCGGCCC GACGCCGCCG GCGACTGGTT TCGGAGGCTT CCCGCCCTAC CTGGTCGGCG GTGGCGGCCC AGGAATAGGG TTCGGCTCGG GACAGTCGGC CCACGCCAAG GCCGCGGCGT CCGATTCCGC TGCAGCCGAG TCGGCGGCCC AGGCCTCGGC GCGTGCGCAG GCGCGTGCTG CACGGCGGGG CCGCTCGGCG GCGAAGGCAC GTGGCCATCG TGACGAATTC GTCACGATGG ACATGGGTTT CGACGCGGCA GCTCCGGCCC CAGAGCACCA GCCGGGTGCC CGGGCGTCCG ACTGTGGTGC GGGACCTATC GGATTTGCTG GCACGGTGCG CAAAGAGGCG GTCGTGAAAG CGGCGGGGTT GACCACGCTG GCCGGTGACG ACTTCGGCGG CGGCCCAACG ATGCCGATGA TGCCCGGCAC CTGGACCCAT GATCAGGGCG TGTTCGACGA GCATCGCTGA
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Protein sequence | MTEPWIAFPP EVHSAMLNYG AGVGPMLISA TQNGELSAQY AEAASEVEEL LGVVASEGWQ GQAAEAFVAA YMPFLAWLIQ ASADCVEMAA QQHVVIEAYT AAVELMPTQV ELAANQIKLA VLVATNFFGI NTIPIAINEA EYVEMWVRAA TTMATYSTVS RSALSAMPHT SPPPLILKSD ELLPDTGEDS DEDGHNHGGH SHGGHARMID NFFAEILRGV SAGRIVWDPV NGTLNGLDYD DYVYPGHAIW WLARGLEFFQ DGEQFGELLF TNPTGAFQFL LYVVVVDLPT HIAQIATWLG QYPQLLSAAL TGVIAHLGAI TGLAGLSGLS AIPSAAIPAV VPELTPVAAA PPMLAVAGVG PAVAAPGMLP ASAPAPAAAA GATAAGPTPP ATGFGGFPPY LVGGGGPGIG FGSGQSAHAK AAASDSAAAE SAAQASARAQ ARAARRGRSA AKARGHRDEF VTMDMGFDAA APAPEHQPGA RASDCGAGPI GFAGTVRKEA VVKAAGLTTL AGDDFGGGPT MPMMPGTWTH DQGVFDEHR
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