| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11307 |
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| Symbol | |
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| ID | 5221984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium tuberculosis F11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009565 |
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| Strand | - |
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| Start bp | 1437200 |
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| End bp | 1439038 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640606061 |
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| Product | oligopeptide-transport ATP-binding protein ABC transporter oppD |
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| Protein accession | YP_001287252 |
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| Protein GI | 148822498 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 346 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 235 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCC TGCTCGAGGT GACCGATTTG GCCGTCACCT TCAGGACCGA TGGCGATCCG
GTGACCGCGG TGCGCGGGAT CAGCTACCGC GTCGAGCCCG GCGAGGTGGT CGCGATGGTG
GGCGAATCGG GTTCAGGTAA GTCCGCAGCG GCGATGGCGG TGGTGGGCCT GCTGCCCGAG
TACGCGCAGG TGCGTGGTTC GGTTCGGCTA CAGGGTACCG AACTGTTGGG GCTTGCCGAC
AACGCGATGT CCCGGTTTCG AGGCAAGGCG ATCGGCACGG TGTTCCAGGA TCCGATGTCT
GCGCTCACCC CTGTCTACAC CGTCGGCGAC CAAATCGCCG AGGCCATCGA GGTGCACCAG
CCCCGTGTTG GCAAGAAGGC CGCTCGTCGG CGTGCGGTGG AACTGCTTGA CCTGGTCGGT
ATTTCGCAGC CGCAGCGGCG TTCCCGTGCG TTTCCGCATG AGCTTTCAGG TGGCGAACGC
CAACGCGTGG TGATCGCCAT CGCGATCGCC AACGATCCCG ACCTGTTGAT CTGTGACGAA
CCGACCACGG CGCTCGACGT CACGGTGCAG GCGCAGATCC TCGACGTCCT CAAGGCGGCG
CGCGACGTCA CCGGCGCCGG GGTGCTGATC ATCACCCACG ACCTCGGCGT CGTGGCCGAG
TTCGCCGACC GGGCGCTGGT GATGTACGCC GGACGGGTCG TCGAGTCGGC CGGGGTGAAT
GATCTGTACC GCGATCGCCG GATGCCCTAC ACCGTGGGGC TTTTAGGCTC GGTCCCCCGG
CTGGATGCCG CGCAGGGCAC CCGGCTGGTG CCGATACCGG GTGCGCCCCC GTCGCTGGCG
GGCTTGGCAC CGGGTTGCCC GTTCGCGCCG CGCTGCCCGC TAGTCATCGA CGAATGCCTT
ACCGCGGAAC CCGAATTGCT TGACGTCGCT ACCGATCACC GGGCGGCCTG CATCCGCACC
GAGCTGGTCA CCGGGCGCAG CGCCGCCGAC ATCTACCGGG TCAAAACCGA GGCCCGCCCG
GCTGCACTCG GCGACGCCTC GGTGGTCGTG CGGGTACGTC ATCTAGTCAA AACCTACCGG
CTGGCCAAGG GCGTGGTGCT GCGCCGGGCG ATCGGCGAGG TCCGCGCGGT CGACGGCATC
AGTCTCGAAC TCCGGCAGGG CCGCACGTTG GGTATCGTCG GCGAATCCGG TTCGGGCAAG
TCGACCACCC TGCACGAGAT CCTGGAGCTG GCTGCGCCGC AATCGGGATC GATCGAAGTC
CTCGGCACTG ACGTCGCCAC GCTGGGGACA GCGGAACGCC GATCGCTGCG CCGCGACATC
CAGGTGGTCT TCCAAGACCC GGTGGCGTCC TTAGACCCGC GGCTGCCGGT CTTCGATCTG
ATTGCCGAAC CATTGCAGGC CAATGGGTTC GGCAAGAACG AGACTCACGC GCGGGTCGCC
GAGCTGCTCG ATATCGTCGG ACTGCGCCAC GGCGACGCCA GTCGTTATCC CGCCGAGTTC
TCCGGCGGTC AGAAGCAGCG CATCGGCATC GCGCGGGCAC TGGCGCTCCA ACCCAAGATC
CTGGCACTCG ACGAACCGGT GTCGGCACTC GATGTCTCCA TTCAGGCCGG GATCATCAAC
CTGCTGCTCG ACCTCCAAGA GCAGTTCGGG TTGTCATATT TATTTGTTTC CCACGATCTT
TCGGTGGTCA AACACCTCGC CCACCAGGTG GCGGTCATGC TTGCCGGTAC CGTTGTTGAG
CAGGGCGACA GTGAGGAGGT CTTCGGCAAT CCGAAACACG AGTACACCAG GCGACTGCTG
GGCGCGGTAC CGCAACCGGA TCCGGCCCGT CGTGGCTGA
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| Protein sequence | MSPLLEVTDL AVTFRTDGDP VTAVRGISYR VEPGEVVAMV GESGSGKSAA AMAVVGLLPE
YAQVRGSVRL QGTELLGLAD NAMSRFRGKA IGTVFQDPMS ALTPVYTVGD QIAEAIEVHQ
PRVGKKAARR RAVELLDLVG ISQPQRRSRA FPHELSGGER QRVVIAIAIA NDPDLLICDE
PTTALDVTVQ AQILDVLKAA RDVTGAGVLI ITHDLGVVAE FADRALVMYA GRVVESAGVN
DLYRDRRMPY TVGLLGSVPR LDAAQGTRLV PIPGAPPSLA GLAPGCPFAP RCPLVIDECL
TAEPELLDVA TDHRAACIRT ELVTGRSAAD IYRVKTEARP AALGDASVVV RVRHLVKTYR
LAKGVVLRRA IGEVRAVDGI SLELRQGRTL GIVGESGSGK STTLHEILEL AAPQSGSIEV
LGTDVATLGT AERRSLRRDI QVVFQDPVAS LDPRLPVFDL IAEPLQANGF GKNETHARVA
ELLDIVGLRH GDASRYPAEF SGGQKQRIGI ARALALQPKI LALDEPVSAL DVSIQAGIIN
LLLDLQEQFG LSYLFVSHDL SVVKHLAHQV AVMLAGTVVE QGDSEEVFGN PKHEYTRRLL
GAVPQPDPAR RG
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