| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_11230 |
|---|
| Symbol | |
|---|
| ID | 5221907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 1353096 |
|---|
| End bp | 1354889 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640605984 |
|---|
| Product | long-chain-acyl-CoA synthetase |
|---|
| Protein accession | YP_001287175 |
|---|
| Protein GI | 148822421 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 236 |
|---|
| Plasmid unclonability p-value | 0.0151554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 195 |
|---|
| Fosmid unclonability p-value | 0.367156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGATT ACTACGGCGG CGCACACACA ACGGTCAGGC TGATCGACCT GGCAACTCGG
ATGCCGCGAG TGTTGGCGGA CACGCCGGTG ATTGTGCGTG GGGCAATGAC CGGGCTGCTG
GCCCGGCCGA ATTCCAAGGC GTCGATCGGC ACGGTGTTCC AGGACCGGGC CGCTCGCTAC
GGTGACCGAG TCTTCCTGAA ATTCGGCGAT CAGCAGCTGA CCTACCGCGA CGCTAACGCC
ACCGCCAACC GGTACGCCGC GGTGTTGGCC GCCCGCGGCG TCGGCCCCGG CGACGTCGTT
GGCATCATGT TGCGTAACTC ACCCAGCACA GTCTTGGCGA TGCTGGCCAC GGTCAAGTGC
GGCGCTATCG CCGGCATGCT CAACTACCAC CAGCGCGGCG AGGTGTTGGC GCACAGCCTG
GGTCTGCTGG ACGCGAAGGT ACTGATCGCA GAGTCCGACT TGGTCAGCGC CGTCGCCGAA
TGCGGCGCCT CGCGCGGCCG GGTAGCGGGC GACGTGCTGA CCGTCGAGGA CGTGGAGCGA
TTCGCCACAA CGGCGCCCGC CACCAACCCG GCGTCGGCGT CGGCGGTGCA AGCCAAAGAC
ACCGCGTTCT ACATCTTCAC CTCGGGCACC ACCGGATTTC CCAAGGCCAG TGTCATGACG
CATCATCGGT GGCTGCGGGC GCTGGCCGTC TTCGGAGGGA TGGGGCTGCG GCTGAAGGGT
TCCGACACGC TCTACAGCTG CCTGCCGCTG TACCACAACA ACGCGTTAAC GGTCGCGGTG
TCGTCGGTGA TCAATTCTGG GGCGACCCTG GCGCTGGGTA AGTCGTTTTC GGCGTCGCGG
TTCTGGGATG AGGTGATTGC CAACCGGGCG ACGGCGTTCG TCTACATCGG CGAAATCTGC
CGTTATCTGC TCAACCAGCC GGCCAAGCCG ACCGACCGTG CCCACCAGGT GCGGGTGATC
TGCGGTAACG GGCTGCGGCC GGAGATCTGG GATGAGTTCA CCACCCGCTT CGGGGTCGCG
CGGGTGTGCG AGTTCTACGC CGCCAGCGAA GGCAACTCGG CCTTTATCAA CATCTTCAAC
GTGCCCAGGA CCGCCGGGGT ATCGCCGATG CCGCTTGCCT TTGTGGAATA CGACCTGGAC
ACCGGCGATC CGCTGCGGGA TGCGAGCGGG CGAGTGCGTC GGGTACCCGA CGGTGAACCC
GGCCTGTTGC TTAGCCGGGT CAACCGGCTG CAGCCGTTCG ACGGCTACAC CGACCCGGTT
GCCAGCGAAA AGAAGTTGGT GCGCAACGCT TTTCGAGATG GCGACTGTTG GTTCAACACC
GGTGACGTGA TGAGCCCGCA GGGCATGGGC CATGCCGCCT TCGTCGATCG GCTGGGCGAC
ACCTTCCGCT GGAAGGGCGA GAATGTCGCC ACCACTCAGG TCGAAGCGGC ACTGGCCTCC
GACCAGACCG TCGAGGAGTG CACGGTCTAC GGCGTCCAGA TTCCGCGCAC CGGCGGGCGC
GCCGGAATGG CCGCGATCAC ACTGCGCGCT GGCGCCGAAT TCGACGGCCA GGCGCTGGCC
CGAACGGTTT ACGGTCACTT GCCCGGCTAT GCACTTCCGC TCTTTGTTCG GGTAGTGGGG
TCGCTGGCGC ACACCACGAC GTTCAAGAGT CGCAAGGTGG AGTTGCGCAA CCAGGCCTAT
GGCGCCGACA TCGAGGATCC GCTGTACGTA CTGGCCGGCC CGGACGAAGG ATATGTGCCG
TACTACGCCG AATACCCTGA GGAGGTTTCG CTCGGAAGGC GACCGCAGGG CTAG
|
|---|
| Protein sequence | MSDYYGGAHT TVRLIDLATR MPRVLADTPV IVRGAMTGLL ARPNSKASIG TVFQDRAARY
GDRVFLKFGD QQLTYRDANA TANRYAAVLA ARGVGPGDVV GIMLRNSPST VLAMLATVKC
GAIAGMLNYH QRGEVLAHSL GLLDAKVLIA ESDLVSAVAE CGASRGRVAG DVLTVEDVER
FATTAPATNP ASASAVQAKD TAFYIFTSGT TGFPKASVMT HHRWLRALAV FGGMGLRLKG
SDTLYSCLPL YHNNALTVAV SSVINSGATL ALGKSFSASR FWDEVIANRA TAFVYIGEIC
RYLLNQPAKP TDRAHQVRVI CGNGLRPEIW DEFTTRFGVA RVCEFYAASE GNSAFINIFN
VPRTAGVSPM PLAFVEYDLD TGDPLRDASG RVRRVPDGEP GLLLSRVNRL QPFDGYTDPV
ASEKKLVRNA FRDGDCWFNT GDVMSPQGMG HAAFVDRLGD TFRWKGENVA TTQVEAALAS
DQTVEECTVY GVQIPRTGGR AGMAAITLRA GAEFDGQALA RTVYGHLPGY ALPLFVRVVG
SLAHTTTFKS RKVELRNQAY GADIEDPLYV LAGPDEGYVP YYAEYPEEVS LGRRPQG
|
|---|
| |